From 4e647a4278ba136a4dacfcbb254e34318bf810ea Mon Sep 17 00:00:00 2001
From: mcquin <mcquin@broadinstitute.org>
Date: Wed, 27 Sep 2017 08:48:07 -0400
Subject: [PATCH 1/3] PyPI only supports one author/author email in setup

---
 CONTRIBUTORS.md |  6 ++++++
 setup.py        | 14 +++-----------
 2 files changed, 9 insertions(+), 11 deletions(-)
 create mode 100644 CONTRIBUTORS.md

diff --git a/CONTRIBUTORS.md b/CONTRIBUTORS.md
new file mode 100644
index 0000000..b2af30a
--- /dev/null
+++ b/CONTRIBUTORS.md
@@ -0,0 +1,6 @@
+# Contributors
+
+cytominer-database initially developed by
+- [Allen Goodman](https://github.com/0x00b1/)
+- [Claire McQuin](https://github.com/mcquin/)
+- [Shantanu Singh](https://github.com/shntnu/)
diff --git a/setup.py b/setup.py
index 3458821..d9a2ae3 100644
--- a/setup.py
+++ b/setup.py
@@ -3,17 +3,9 @@
 
 setuptools.setup(
     name='cytominer_database',
-    version='0.0.1b1',
-    author=[
-        'Allen Goodman',
-        "Claire McQuin",
-        "Shantanu Singh"
-    ],
-    author_email=[
-        "allen.goodman@icloud.com",
-        "mcquincl@gmail.com",
-        "shsingh@broadinstitute.org"
-    ],
+    version='0.0.1b2',
+    author="Shantanu Singh",
+    author_email="shsingh@broadinstitute.org",
     entry_points="""
     [console_scripts]
     cytominer-database=cytominer_database.command:command

From f345443a46b992ef6e9a25e370ffbe399f56a646 Mon Sep 17 00:00:00 2001
From: mcquin <mcquin@broadinstitute.org>
Date: Wed, 27 Sep 2017 09:46:31 -0400
Subject: [PATCH 2/3] create requirements_doc (& remove outdated requirements)

---
 requirements.txt     | 3 ---
 requirements_doc.txt | 2 ++
 setup.py             | 8 +++++---
 3 files changed, 7 insertions(+), 6 deletions(-)
 delete mode 100644 requirements.txt
 create mode 100644 requirements_doc.txt

diff --git a/requirements.txt b/requirements.txt
deleted file mode 100644
index cd8c47d..0000000
--- a/requirements.txt
+++ /dev/null
@@ -1,3 +0,0 @@
---index-url https://pypi.python.org/simple/
-
--e .
diff --git a/requirements_doc.txt b/requirements_doc.txt
new file mode 100644
index 0000000..07ae8f7
--- /dev/null
+++ b/requirements_doc.txt
@@ -0,0 +1,2 @@
+sphinx>=1.6.4
+sphinx_rtd_theme>=0.2.5b1
diff --git a/setup.py b/setup.py
index d9a2ae3..752ce04 100644
--- a/setup.py
+++ b/setup.py
@@ -1,6 +1,10 @@
 import setuptools
 
 
+with open("requirements_doc.txt", "r") as f:
+    doc_requirements = f.read().splitlines()
+
+
 setuptools.setup(
     name='cytominer_database',
     version='0.0.1b2',
@@ -13,9 +17,7 @@
     extras_require={
         "dev": [
             "pytest>=3.2.2",
-            "sphinx>=1.6.3",
-            "sphinx_rtd_theme>=0.2.5b1"
-        ]
+        ] + doc_requirements
     },
     long_description="cytominer-database provides mechanisms to import CSV "
                      "files generated in a morphological profiling experiment "

From d503d9a7b87245fced2992c44c037a2165daf996 Mon Sep 17 00:00:00 2001
From: mcquin <mcquin@broadinstitute.org>
Date: Wed, 27 Sep 2017 09:59:42 -0400
Subject: [PATCH 3/3] deploy on python 3

---
 .travis.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.travis.yml b/.travis.yml
index a3b1239..ae28c3b 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -23,6 +23,7 @@ deploy:
     on:
       tags: true
       repo: cytomining/cytominer-database
+      python: "3.5"
     skip_cleanup: true
     password:
       secure: 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