fix: automatically generate report.html (#178)

Author: njzjz

.travis.yml

@@ -12,6 +12,7 @@ install:
 - yarn
 script:
 - tox
+- cp testfiles-*/bonds.reaxc.html docs/.vuepress/public/report.html 
 - yarn docs:build
 deploy:
   provider: pages

README.md

@@ -46,7 +46,7 @@ ReacNetGenerator can process any kind of trajectory files containing atomic coor
 ```bash
 reacnetgenerator --dump -i dump.reaxc -a C H O
 ```
-where C, H, and O are atomic names in the input file. [Analysis report](/r.html) will be generated automatically.
+where C, H, and O are atomic names in the input file. [Analysis report](https://njzjz.github.io/reacnetgenerator/report.html) will be generated automatically.
 
 Also, ReacNetGenerator can process files containing bond information, e.g. LAMMPS bond file:
 

docs/.vuepress/public/report.html

@@ -55,7 +55,7 @@ ReacNetGenerator can process any kind of trajectory files containing atomic coor
 ```bash
 reacnetgenerator --dump -i dump.reaxc -a C H O
 ```
-where C, H, and O are atomic names in the input file. [Analysis report](/r.html) will be generated automatically.
+where C, H, and O are atomic names in the input file. [Analysis report](https://njzjz.github.io/reacnetgenerator/report.html) will be generated automatically.
 
 Also, ReacNetGenerator can process files containing bond information, e.g. LAMMPS bond file:
 

docs/README.md

@@ -56,7 +56,7 @@ ReacNetGenerator可以处理任意类型含有原子坐标的轨迹文件，例
 reacnetgenerator --dump -i dump.reaxc -a C H O
 ```
 
-其中，C、H、O 是轨迹中的原子种类。软件将自动生成[分析结果](/r.html)。
+其中，C、H、O 是轨迹中的原子种类。软件将自动生成[分析结果](https://njzjz.github.io/reacnetgenerator/report.html)。
 
 软件也可以处理含有键级信息的文件，例如LAMMPS键级文件：
 

docs/r.md

@@ -16,15 +16,15 @@
 import requests
 from tqdm import tqdm
 
-
+this_directory = os.getcwd()
 class TestReacNetGen:
     """Test ReacNetGenerator."""
 
     @pytest.fixture(params=json.load(
         pkg_resources.resource_stream(
             __name__, 'test.json')))
     def reacnetgen(self, request):
-        folder = tempfile.mkdtemp(prefix='testfiles-', dir='.')
+        folder = tempfile.mkdtemp(prefix='testfiles-', dir=this_directory)
         logging.info(f'Folder: {folder}:')
         os.chdir(folder)