Update patch

Author: hcho3

ops/patch/cpu_only_pypkg.patch

@@ -34,10 +34,10 @@ index 1fc0bb5a0..f1c68470b 100644
 +Note. ``xgboost-cpu`` does not provide an sdist (source distribution). You may install sdist
 +from https://pypi.org/project/xgboost/.
 diff --git python-package/pyproject.toml python-package/pyproject.toml
-index 46c1451c2..c5dc908d9 100644
+index 32abff1c6..5206f2e31 100644
 --- python-package/pyproject.toml
 +++ python-package/pyproject.toml
-@@ -6,7 +6,7 @@ backend-path = ["."]
+@@ -7,7 +7,7 @@ backend-path = ["."]
  build-backend = "packager.pep517"
 
  [project]
@@ -46,10 +46,13 @@ index 46c1451c2..c5dc908d9 100644
  description = "XGBoost Python Package"
  readme = { file = "README.rst", content-type = "text/x-rst" }
  authors = [
-@@ -82,3 +82,6 @@ class-attribute-naming-style = "snake_case"
+@@ -71,6 +71,9 @@ disable = [
+ dummy-variables-rgx = "(unused|)_.*"
+ reports = false
 
- # Allow single-letter variables
- variable-rgx = "[a-zA-Z_][a-z0-9_]{0,30}$"
-+
 +[tool.hatch.build.targets.wheel]
 +packages = ["xgboost/"]
++
+ [tool.pylint.basic]
+ # Enforce naming convention
+ const-naming-style = "UPPER_CASE"

ops/patch/manylinux2014_warning.patch

@@ -1,8 +1,8 @@
 diff --git python-package/xgboost/core.py python-package/xgboost/core.py
-index e8bc735e6..030972ef2 100644
+index 079246239..2f1764812 100644
 --- python-package/xgboost/core.py
 +++ python-package/xgboost/core.py
-@@ -262,6 +262,18 @@ Likely cause:
+@@ -281,6 +281,18 @@ Likely cause:
          )
          raise ValueError(msg)
 
@@ -15,7 +15,7 @@ index e8bc735e6..030972ef2 100644
 +        "features such as GPU algorithms or federated learning are not available. "
 +        "To use these features, please upgrade to a recent Linux distro with glibc "
 +        "2.28+, and install the 'manylinux_2_28' variant.",
-+        FutureWarning
++        FutureWarning,
 +    )
 +
      return lib

ops/patch/remove_nccl_dep.patch

@@ -1,8 +1,8 @@
 diff --git python-package/pyproject.toml python-package/pyproject.toml
-index 20d3f9974..953087ff4 100644
+index b9f08dda6..32abff1c6 100644
 --- python-package/pyproject.toml
 +++ python-package/pyproject.toml
-@@ -30,7 +30,6 @@ classifiers = [
+@@ -32,7 +32,6 @@ classifiers = [
  dependencies = [
      "numpy",
      "scipy",