forked from jbloomlab/PB2-DMS
-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathSraRunTable_DMS.txt
More file actions
executable file
·13 lines (13 loc) · 4.77 KB
/
SraRunTable_DMS.txt
File metadata and controls
executable file
·13 lines (13 loc) · 4.77 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
AvgSpotLen BioSample Experiment Instrument LibraryLayout LibrarySource Library_Name LoadDate MBases MBytes Mutant ReleaseDate Run SRA_Sample Sample_Name Timepoint collection_date lab_host replicate Assay_Type BioProject BioSampleModel Center_Name Consent DATASTORE_filetype DATASTORE_provider InsertSize LibrarySelection Organism Platform SRA_Study geo_loc_name isolate isolation_source
500 SAMN10640022 SRX5176706 Illumina HiSeq 2500 PAIRED GENOMIC DNA-WT 2018-12-22 3048 1339 2018-12-22 SRR8366375 SRS4183990 DNA-WT 2018-03 NA WT AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640021 SRX5176705 Illumina HiSeq 2500 PAIRED GENOMIC DNA-Lib6 2018-12-22 11342 5038 2018-12-22 SRR8366376 SRS4183989 DNA-Lib-Rep3 2018-03 NA biological replicate 3 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640018 SRX5176704 Illumina HiSeq 2500 PAIRED VIRAL RNA CCL141-WT 2018-12-22 3143 1379 2018-12-22 SRR8366377 SRS4183988 CCL141-WT 2018-03 CCL-141 cells WT AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640017 SRX5176703 Illumina HiSeq 2500 PAIRED VIRAL RNA CCL141-Lib6 2018-12-22 12208 5348 2018-12-22 SRR8366378 SRS4183987 CCL141-MutVirusLib-Rep3 2018-03 CCL-141 cells biological replicate 3 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640016 SRX5176702 Illumina HiSeq 2500 PAIRED VIRAL RNA CCL141-Lib5 2018-12-22 13699 5998 2018-12-22 SRR8366379 SRS4183986 CCL141-MutVirusLib-Rep2 2018-03 CCL-141 cells biological replicate 2 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640015 SRX5176701 Illumina HiSeq 2500 PAIRED VIRAL RNA CCL141-Lib4 2018-12-22 12396 5459 2018-12-22 SRR8366380 SRS4183985 CCL141-MutVirusLib-Rep1 2018-03 CCL-141 cells biological replicate 1 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640014 SRX5176700 Illumina HiSeq 2500 PAIRED VIRAL RNA A549-WT 2018-12-22 3286 1442 2018-12-22 SRR8366381 SRS4183984 A549-WT 2018-03 A549 cells WT AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640013 SRX5176699 Illumina HiSeq 2500 PAIRED VIRAL RNA A549-Lib6 2018-12-22 13669 5978 2018-12-22 SRR8366382 SRS4183983 A549-MutVirusLib-Rep3 2018-03 A549 cells biological replicate 3 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640012 SRX5176698 Illumina HiSeq 2500 PAIRED VIRAL RNA A549-Lib5 2018-12-22 13719 6010 2018-12-22 SRR8366383 SRS4183982 A549-MutVirusLib-Rep2 2018-03 A549 cells biological replicate 2 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640011 SRX5176697 Illumina HiSeq 2500 PAIRED VIRAL RNA A549-Lib4 2018-12-22 10632 4651 2018-12-22 SRR8366384 SRS4183981 A549-MutVirusLib-Rep1 2018-03 A549 cells biological replicate 1 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640020 SRX5176696 Illumina HiSeq 2500 PAIRED GENOMIC DNA-Lib5 2018-12-22 14661 6422 2018-12-22 SRR8366385 SRS4183980 DNA-Lib-Rep2 2018-03 NA biological replicate 2 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture
500 SAMN10640019 SRX5176695 Illumina HiSeq 2500 PAIRED GENOMIC DNA-Lib4 2018-12-22 13721 6006 2018-12-22 SRR8366386 SRS4183979 DNA-Lib-Rep1 2018-03 NA biological replicate 1 AMPLICON PRJNA511556 Viral FRED HUTCHINSON CANCER RESEARCH CENTER public sra ncbi 0 PCR Influenza A virus ILLUMINA SRP174355 USA: Seattle A/Green-winged Teal/ Ohio/175/1986(H2N1) cell culture