Generate only one trimmed MSA

Author: nicodr97

scripts/generate_trimmed_msas.sh

@@ -6,6 +6,11 @@ mkdir test_msas/automated1
 mkdir test_msas/nogaps
 mkdir test_msas/noallgaps
 
+./bin/trimal -in dataset/example.014.AA.EggNOG.COG0591.fasta -gappyout -out test_msas/gappyout/example.014.AA.EggNOG.COG0591.fasta
+./bin/trimal -in dataset/example.014.AA.EggNOG.COG0591.fasta -strict -out test_msas/strict/example.014.AA.EggNOG.COG0591.fasta
+
+exit 1
+
 ./bin/trimal -in dataset/example.004.AA.fasta -gappyout -out test_msas/gappyout/example.004.AA.fasta
 ./bin/trimal -in dataset/example.004.AA.fasta -strict -out test_msas/strict/example.004.AA.fasta
 ./bin/trimal -in dataset/example.004.AA.fasta -strictplus -out test_msas/strictplus/example.004.AA.fasta