DESCRIPTION

Package: SCPA
Title: Single Cell Pathway Analysis
Version: 1.6.2
Authors@R: 
    c(person(given = "Jack", family = "Bibby", email = "jack.bibby@nih.gov", role = c("aut", "cre")),
      person(given = "Divyansh", family = "Agarwal", role = c("aut")))
Description: A package for performing pathway analysis on single cell data. 
    SCPA relies on understanding changes in multivariate distributions 
    of pathways between samples as a basis for judging biological 
    relevance. Two basic arguments are necessary = 1) matrices of data,
    and 2) pathways that you want to analyse. See the GitHub page at
    <https://github.com/jackbibby1/SCPA> for a detailed description and tutorials.
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.3
URL: https://jackbibby1.github.io/SCPA/, https://github.com/jackbibby1/SCPA/
BugReports: https://github.com/jackbibby1/SCPA/issues/
Imports: 
    circlize (>= 0.4.15),
    clustermole (>= 1.1.0),
    ComplexHeatmap (>= 2.16.0),
    doParallel (>= 1.0.17),
    dplyr (>= 1.0.9),
    foreach (>= 1.5.2),
    ggplot2 (>= 3.3.6),
    ggrepel (>= 0.9.1),
    magrittr (>= 2.0.3),
    multicross (>= 2.1.0),
    purrr (>= 0.3.4),
    Seurat (>= 4.1.1),
    SeuratObject (>= 5.0.1),
    stats (>= 4.1.0),
    stringr (>= 1.4.0),
    SummarizedExperiment (>= 1.30),
    tibble (>= 3.1.7),
    tidyr (>= 1.2.0),
    utils (>= 4.1.0)
Suggests: 
    rmarkdown,
    knitr,
    spelling,
    msigdbr (>= 7.5.1)
VignetteBuilder: knitr
Depends: 
    R (>= 2.10)
Language: en-GB