- Fixes data type issue for Google Big Query (Issue #51).
- Removes the
databaseId
field from the cohort inclusion table (Issue #52) - Adds the ability to generate negative control outcome cohorts for use in population-level estimation. (Issue #9)
- Add more flexibility when reading/writing CSV files including appending (Issue #44), flags for disabling warnings (Issue #38) and removing unhelpful warnings (Issue #43).
- Added better error handling to
saveCohortDefinitionSet
(Issue #25) - Add better handling of column name casing in CSV files that hold cohort settings. (Issue #37)
- Added functions to check if a data.frame conforms to a cohortDefinitionSet (Issue #21)
- Allow for specification of the database_id in export methods. (Issue #18)
getCohortStats
function allows for exporting cohort statistics into data frames (Pull Request #24)- Add utility methods for reading/writing CSV files. (Issue #16)
- Update dependency versions in DESCRIPTION to resolve issues when using older versions of readr/stringi. (Issue #13)
- Breaking change: change the defaults for saving/getting a cohortDefinitionSet to/from the file system. (Issue #16)
getCohortCounts
now supports an optional parametercohortDefinitionSet
which will join the cohort counts with the cohort definition set when desired (Issue #14)
- Added
getCohortDefintionSet
function for retrieving a cohort definition set from either a package or the file system - Re-factored
saveCohortDefinitionSet
to remove thesettingsFolder
. ThesettingsFileName
should include the path to the file. - Bug fixes
- Renamed
createCohortTable
tocreateCohortTables
to include all cohort statistics tables - Renamed
createEmptyCohortSet
tocreateEmptyCohortDefinitionSet
to make this consistent with ROhdsiWebApi and CohortDiagnostics - Added
dropCohortStatsTables
function for removing cohort statistics tables - Added
exportCohortStatsTables
function for exporting cohort statistics to CSV files - Added
getCohortTableNames
function to define the list of cohort table names to create - Added
insertInclusionRuleNames
for inserting the inclusion rule names into the cohort stats table - Added
saveCohortDefinitionSet
to save the cohort definition set to the file system for use by study packages - Added a vignette and updated documentation
- Remove CirceR dependency and related functions
Fixing documentation
Updating function calls to use "generate" instead of "instantiate"
Initial version