0.5.2

Author: jinseob2kim

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: jskm
 Title: Kaplan-Meier Plot with 'ggplot2'
-Version: 0.5.1
-Date: 2023-07-26
+Version: 0.5.2
+Date: 2023-08-04
 Authors@R: c(person("Jinseob", "Kim", email = "[email protected]", role = c("aut", "cre"),  comment = c(ORCID = "0000-0002-9403-605X")),
              person("Zarathu", role = c("cph", "fnd"))
              )

NEWS.md

@@ -1,3 +1,7 @@
+# jskm 0.5.2
+
+* Update: Add `linewidth` option
+
 # jskm 0.5.1
 
 * Fix: line color problem when apply landmark analysis

R/jskm.R

@@ -33,6 +33,7 @@
 #' @param cut.landmark cut-off for landmark analysis, Default = NULL
 #' @param showpercent Shows the percentages on the right side.
 #' @param status.cmprsk Status value when competing risk analysis, Default = 2nd level of status variable
+#' @param linewidth Line witdh, Default = 0.75
 #' @param ... PARAM_DESCRIPTION
 #' @return Plot
 #' @details DETAILS
@@ -109,6 +110,7 @@ jskm <- function(sfit,
                  cut.landmark = NULL,
                  showpercent = F,
                  status.cmprsk = NULL,
+                 linewidth = 0.75,
                  ...) {
 
 
@@ -347,13 +349,13 @@ jskm <- function(sfit,
 
   #Add lines too plot
   if (is.null(cut.landmark)){
-    p <- p + geom_step(linewidth = 0.75) +
+    p <- p + geom_step(linewidth = linewidth) +
       scale_linetype_manual(name = ystrataname, values=linetype) +
       scale_colour_brewer(name = ystrataname, palette=linecols)
   } else{
     p <- p +
       scale_linetype_manual(name = ystrataname, values=linetype) +  
-      geom_step(data = subset(df, time >= cut.landmark), linewidth = 0.75) + geom_step(data = subset(df, time < cut.landmark), linewidth = 0.75) + 
+      geom_step(data = subset(df, time >= cut.landmark), linewidth = linewidth) + geom_step(data = subset(df, time < cut.landmark), linewidth = linewidth) + 
       scale_colour_brewer(name = ystrataname, palette=linecols)
   }
 

R/svyjskm.R

@@ -27,6 +27,7 @@
 #' @param size.label.nrisk Font size of label.nrisk. Default = 10
 #' @param cut.landmark cut-off for landmark analysis, Default = NULL
 #' @param showpercent Shows the percentages on the right side.
+#' @param linewidth Line witdh, Default = 0.75
 #' @param ... PARAM_DESCRIPTION
 #' @return plot
 #' @details DETAILS
@@ -74,6 +75,7 @@ svyjskm <- function(sfit,
                     size.label.nrisk = 10,
                     cut.landmark = NULL,
                     showpercent = F,
+                    linewidth = 0.75,
                     ...) {
 
   surv <- strata <- lower <- upper <- NULL
@@ -276,11 +278,11 @@ svyjskm <- function(sfit,
 
   #Add lines too plot
   if (is.null(cut.landmark)){
-    p <- p + geom_step(linewidth = 0.75) +
+    p <- p + geom_step(linewidth = linewidth) +
       scale_linetype_manual(name = ystrataname, values=linetype) +
       scale_colour_brewer(name = ystrataname, palette=linecols)
   } else{
-    p <- p + geom_step(data = subset(df, time < cut.landmark), linewidth = 0.75) + geom_step(data = subset(df, time >= cut.landmark), linewidth = 0.75) + 
+    p <- p + geom_step(data = subset(df, time < cut.landmark), linewidth = linewidth) + geom_step(data = subset(df, time >= cut.landmark), linewidth = linewidth) + 
       scale_linetype_manual(name = ystrataname, values=linetype) +
       scale_colour_brewer(name = ystrataname, palette=linecols)
   }