tbdb.variables.json

{"db-schema-version": "2.0.0", "snpEff_db": "Mycobacterium_tuberculosis_h37rv", "drugs": ["rifampicin", "isoniazid", "ethambutol", "pyrazinamide", "moxifloxacin", "levofloxacin", "bedaquiline", "delamanid", "pretomanid", "linezolid", "streptomycin", "amikacin", "kanamycin", "capreomycin", "clofazimine", "ethionamide", "para-aminosalicylic_acid", "cycloserine"], "tb-profiler-version": ">=6.6.0,<7.0.0", "version": {"name": "tbdb", "repo": "git@github.com:jodyphelan/tbdb.git", "branch": "tbdb", "commit": "3ed1cb99", "status": "clean", "author": "Jody Phelan", "date": "Sun Feb 16 11:08:45 2025 +0100", "db-schema-version": "2.0.0", "tb-profiler-version": ">=6.6.0,<7.0.0"}, "amplicon": false, "files": {"ref": "tbdb.fasta", "gff": "tbdb.gff", "bed": "tbdb.bed", "json_db": "tbdb.dr.json", "variables": "tbdb.variables.json", "spoligotype_spacers": "tbdb.spoligotype_spacers.txt", "spoligotype_annotations": "tbdb.spoligotype_list.csv", "bedmask": "tbdb.mask.bed", "rules": "tbdb.rules.yml", "barcode": "tbdb.barcode.bed"}}