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Commit 3215faa

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Add new db
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3 files changed

+48494
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db/tbdb.bed

+15-15
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@@ -1,30 +1,30 @@
1-
Chromosome 5040 7467 Rv0005 gyrB fluoroquinolones,levofloxacin,moxifloxacin,ciprofloxacin,ofloxacin
2-
Chromosome 7102 10018 Rv0006 gyrA fluoroquinolones,levofloxacin,moxifloxacin,ciprofloxacin,ofloxacin
1+
Chromosome 5040 7467 Rv0005 gyrB levofloxacin,ciprofloxacin,ofloxacin,moxifloxacin,fluoroquinolones
2+
Chromosome 7102 10018 Rv0006 gyrA levofloxacin,ciprofloxacin,ofloxacin,moxifloxacin,fluoroquinolones
33
Chromosome 490583 491993 Rv0407 fgd1 delamanid
44
Chromosome 575148 576990 Rv0486 mshA ethionamide
55
Chromosome 759607 763525 Rv0667 rpoB rifampicin
66
Chromosome 763170 767520 Rv0668 rpoC rifampicin
7-
Chromosome 778790 779687 Rv0678 mmpR5 bedaquiline,clofazimine
7+
Chromosome 778790 779687 Rv0678 mmpR5 clofazimine,bedaquiline
88
Chromosome 781360 782134 Rv0682 rpsL streptomycin
99
Chromosome 800609 801662 Rv0701 rplC linezolid
1010
Chromosome 1302731 1305701 Rv1173 fbiC delamanid
1111
Chromosome 1415981 1417547 Rv1267c embR ethambutol
1212
Chromosome 1460845 1461490 Rv1305 atpE bedaquiline
13-
Chromosome 1471646 1473582 EBG00000313325 rrs amikacin,aminoglycosides,kanamycin,streptomycin,capreomycin
13+
Chromosome 1471646 1473582 EBG00000313325 rrs aminoglycosides,streptomycin,amikacin,capreomycin,kanamycin
1414
Chromosome 1473458 1476995 EBG00000313339 rrl linezolid
15-
Chromosome 1673240 1674383 Rv1483 fabG1 isoniazid,ethionamide
16-
Chromosome 1674002 1675211 Rv1484 inhA isoniazid,ethionamide
15+
Chromosome 1673148 1674383 Rv1483 fabG1 ethionamide,isoniazid
16+
Chromosome 1673224 1675211 Rv1484 inhA ethionamide,isoniazid
1717
Chromosome 1833342 1835187 Rv1630 rpsA pyrazinamide
1818
Chromosome 1917740 1918946 Rv1694 tlyA capreomycin
19-
Chromosome 2153689 2156311 Rv1908c katG isoniazid
20-
Chromosome 2288481 2289441 Rv2043c pncA pyrazinamide
19+
Chromosome 2153689 2156570 Rv1908c katG isoniazid
20+
Chromosome 2288481 2290323 Rv2043c pncA pyrazinamide
2121
Chromosome 2517915 2519565 Rv2245 kasA isoniazid
22-
Chromosome 2713924 2715532 Rv2416c eis kanamycin
23-
Chromosome 2725993 2726980 Rv2428 ahpC isoniazid
22+
Chromosome 2713924 2715586 Rv2416c eis amikacin,kanamycin
23+
Chromosome 2725912 2726980 Rv2428 ahpC isoniazid
2424
Chromosome 2745935 2747798 Rv2447c folC para-aminosalicylic_acid
25-
Chromosome 2859100 2860618 Rv2535c pepQ bedaquiline,clofazimine
25+
Chromosome 2859100 2860618 Rv2535c pepQ clofazimine,bedaquiline
2626
Chromosome 2986639 2987815 Rv2671 ribD para-aminosalicylic_acid
27-
Chromosome 3066993 3068145 Rv2754c thyX para-aminosalicylic_acid
27+
Chromosome 3066993 3068161 Rv2754c thyX para-aminosalicylic_acid
2828
Chromosome 3073480 3074671 Rv2764c thyA para-aminosalicylic_acid
2929
Chromosome 3086620 3088135 Rv2780 ald cycloserine
3030
Chromosome 3338918 3339962 Rv2983 fbiD delamanid
@@ -34,9 +34,9 @@ Chromosome 3839994 3841620 Rv3423c alr cycloserine
3434
Chromosome 3986644 3987499 Rv3547 ddn delamanid
3535
Chromosome 4043662 4044481 Rv3601c panD pyrazinamide
3636
Chromosome 4239663 4243347 Rv3793 embC ethambutol
37-
Chromosome 4243033 4246717 Rv3794 embA ethambutol
37+
Chromosome 4243004 4246717 Rv3794 embA ethambutol
3838
Chromosome 4246314 4250010 Rv3795 embB ethambutol
3939
Chromosome 4268725 4270033 Rv3806c ubiA ethambutol
40-
Chromosome 4325804 4327673 Rv3854c ethA ethionamide
40+
Chromosome 4325804 4330174 Rv3854c ethA ethionamide
4141
Chromosome 4327349 4328399 Rv3855 ethR ethionamide
42-
Chromosome 4407328 4408402 Rv3919c gid streptomycin
42+
Chromosome 4407328 4408476 Rv3919c gid streptomycin

db/tbdb.dr.json

+48,478-1
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db/tbdb.version.json

+1-1
Original file line numberDiff line numberDiff line change
@@ -1 +1 @@
1-
{"name": "tbdb", "commit": "3592308", "Author": "jodyphelan <[email protected]>", "Date": "Wed Nov 3 08:54:38 2021 +0000"}
1+
{"name": "tbdb", "commit": "7fc199d", "Merge": "bad550a 277d053", "Author": "Jody Phelan <[email protected]>", "Date": "Tue Jan 25 17:21:48 2022 +0000"}

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