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Colistin resistance due to truncation or loss of MgrB or PmrB #36

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CatherineLud opened this issue Mar 10, 2020 · 1 comment
Open

Colistin resistance due to truncation or loss of MgrB or PmrB #36

CatherineLud opened this issue Mar 10, 2020 · 1 comment

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@CatherineLud
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What nucleotide reference sequence is used in Kleborate for detecting MgrB and PmrB mutations? I would like to cross check previous results with Kleborate to ensure that they are consistent.
Best wishes,
Catherine
@katholt
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katholt commented Mar 11, 2020

The reference sequences are in the /data directory: https://github.com/katholt/Kleborate/blob/master/kleborate/data/MgrB_and_PmrB.fasta

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@katholt @CatherineLud