From 1936d771c1ef4fe7948f9554206b6c2d2af71a7b Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Andr=C3=A9=20Vict=C3=B3ria=20Matias?= Date: Sat, 17 Sep 2022 20:06:24 -0300 Subject: [PATCH 1/2] add ufsc ocpap page --- tutorials/Datasets/UFSC OCPap.ipynb | 69 +++++++++++++++++++++++++++++ 1 file changed, 69 insertions(+) create mode 100644 tutorials/Datasets/UFSC OCPap.ipynb diff --git a/tutorials/Datasets/UFSC OCPap.ipynb b/tutorials/Datasets/UFSC OCPap.ipynb new file mode 100644 index 0000000..740ff19 --- /dev/null +++ b/tutorials/Datasets/UFSC OCPap.ipynb @@ -0,0 +1,69 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "# UFSC OCPap: Papanicolaou Stained Oral Cytology Dataset" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "This dataset is available at the Mendelay Data repository: [https://doi.org/10.17632/dr7ydy9xbk.2](https://doi.org/10.17632/dr7ydy9xbk.2)\n", + "\n", + "\n", + "The UFSC OCPap dataset comprises 9,797 labeled images of 1200x1600 pixels acquired from 5 slides of cancer diagnosed and 3 healthy of oral brush samples, from distinct patients.\n", + "\n", + "The slides were provided by the Hospital Dental Center of the University Hospital Professor Polydoro Ernani de São Thiago of Federal University of Santa Catarina (HU-UFSC) and this research was approved by the UFSC Research Ethics Committee (CEPSH), protocol number 23193719.5.0000.0121. All patients were previously approached and informed about the study objectives. Those who agreed to participate signed an Informed Consent Form." + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## Using Hugging Faces Datasets" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "# Installing HF datasets lib\n", + "%pip install datasets" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "from datasets import load_dataset\n", + "\n", + "dataset = load_dataset(\"lapix/UFSC_OCPap\")" + ] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3.9.0 64-bit", + "language": "python", + "name": "python3" + }, + "language_info": { + "name": "python", + "version": "3.9.0" + }, + "vscode": { + "interpreter": { + "hash": "81794d4967e6c3204c66dcd87b604927b115b27c00565d3d43f05ba2f3a2cb0d" + } + } + }, + "nbformat": 4, + "nbformat_minor": 2 +} From 68f4642bed84bb19bbda31ae6a1068678cc83147 Mon Sep 17 00:00:00 2001 From: "pre-commit-ci[bot]" <66853113+pre-commit-ci[bot]@users.noreply.github.com> Date: Sat, 17 Sep 2022 23:08:45 +0000 Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci --- tutorials/Datasets/UFSC OCPap.ipynb | 9 --------- 1 file changed, 9 deletions(-) diff --git a/tutorials/Datasets/UFSC OCPap.ipynb b/tutorials/Datasets/UFSC OCPap.ipynb index 740ff19..cdcb2e0 100644 --- a/tutorials/Datasets/UFSC OCPap.ipynb +++ b/tutorials/Datasets/UFSC OCPap.ipynb @@ -53,15 +53,6 @@ "display_name": "Python 3.9.0 64-bit", "language": "python", "name": "python3" - }, - "language_info": { - "name": "python", - "version": "3.9.0" - }, - "vscode": { - "interpreter": { - "hash": "81794d4967e6c3204c66dcd87b604927b115b27c00565d3d43f05ba2f3a2cb0d" - } } }, "nbformat": 4,