Merge pull request #203 from linkml/docker-setup

Docker setup

Author: amc-corey-cox

DOCKER.md

@@ -0,0 +1,33 @@
+# Building the Pipeline Docker Image
+To build the Docker image, run:
+
+```
+docker build -t dm-bip-env .
+```
+
+# Start the Container
+The image's default command is:
+
+```
+poetry run dm-bip run
+```
+
+To start the container and run the default command:
+```
+docker run --rm dm-bip-env
+```
+
+You should see "Hello, World!" printed in the output.
+
+# Run Other Commands
+If you want to run additional commands inside the container, append them after the image name. For example:
+
+```
+docker run --rm -it dm-bip-env make test
+```
+
+```
+docker run --rm -it dm-bip-env make lint
+```
+
+

Dockerfile

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+FROM python:3.12-slim
+
+ENV DEBIAN_FRONTEND=noninteractive
+
+# Poetry / pip config
+ENV POETRY_VERSION=1.8.4 \
+    POETRY_NO_INTERACTION=1 \
+    PIP_NO_CACHE_DIR=1 \
+    # Force Poetry to create a virtualenv instead of reusing system site-packages
+    POETRY_VIRTUALENVS_CREATE=true \
+    POETRY_DYNAMIC_VERSIONING_BYPASS=true
+
+# System dependencies
+RUN apt-get update && \
+    apt-get install -y --no-install-recommends \
+        build-essential \
+        git \
+    && rm -rf /var/lib/apt/lists/*
+
+# 🔹 Make sure the global tooling is modern enough for Poetry's installer
+RUN pip install --upgrade pip setuptools wheel packaging
+
+# Install Poetry + Cruft
+RUN pip install "poetry==${POETRY_VERSION}" cruft
+
+WORKDIR /app
+
+
+# Copy dependency files first for caching
+#COPY pyproject.toml poetry.lock* ./
+
+# Copy the entire project
+COPY . .
+
+# Install dependencies using the same groups as on your local machine
+# Uses the lock file; will run inside Poetry's own virtualenv
+RUN poetry install --with env --with dev
+
+
+
+# Default command – adjust if needed
+CMD ["poetry", "run", "dm-bip", "run"]