diff --git a/.vscode/launch.json b/.vscode/launch.json index 2412d258d..d9555fbb7 100644 --- a/.vscode/launch.json +++ b/.vscode/launch.json @@ -41,14 +41,21 @@ "type": "python", "request": "launch", "cwd": "${workspaceFolder}/module_text_cofee", - "module": "module_text_cofee", + "module": "module_text_cofee" }, { "name": "Module Programming ThemisML", "type": "python", "request": "launch", "cwd": "${workspaceFolder}/module_programming_themisml", - "module": "module_programming_themisml", + "module": "module_programming_themisml" }, + { + "name": "Module Programming AST", + "type": "python", + "request": "launch", + "cwd": "${workspaceFolder}/module_programming_ast", + "module": "module_programming_ast" + } ] } \ No newline at end of file diff --git a/assessment_module_manager/assessment_module_manager/endpoints/health_endpoint.py b/assessment_module_manager/assessment_module_manager/endpoints/health_endpoint.py index 85879b673..9c3d88cad 100644 --- a/assessment_module_manager/assessment_module_manager/endpoints/health_endpoint.py +++ b/assessment_module_manager/assessment_module_manager/endpoints/health_endpoint.py @@ -33,7 +33,7 @@ class HealthResponse(BaseModel): modules: dict = Field( example=[ { - "module_example": { + "module_programming_ast": { "url": "http://localhost:5001", "type": "programming", "healthy": True, diff --git a/assessment_module_manager/assessment_module_manager/module/module.py b/assessment_module_manager/assessment_module_manager/module/module.py index 65e99931f..0e77258cb 100644 --- a/assessment_module_manager/assessment_module_manager/module/module.py +++ b/assessment_module_manager/assessment_module_manager/module/module.py @@ -5,7 +5,7 @@ class Module(BaseModel): """An Athena module, with the URL to the API as well as the type of module.""" - name: str = Field(example="module_example") + name: str = Field(example="module_programming_ast") url: AnyHttpUrl = Field(example="http://localhost:5001") type: ExerciseType = Field(example=ExerciseType.text) supports_evaluation: bool = Field(description="Whether the module supports evaluation", example=True) diff --git a/assessment_module_manager/modules.docker.ini b/assessment_module_manager/modules.docker.ini index 4c5f74e9b..244d16645 100644 --- a/assessment_module_manager/modules.docker.ini +++ b/assessment_module_manager/modules.docker.ini @@ -21,4 +21,9 @@ supports_evaluation = false [module_programming_themisml] url = http://module-programming-themisml:5005 type = programming +supports_evaluation = false + +[module_programming_ast] +url = http://module-programming-ast:5006 +type = programming supports_evaluation = false \ No newline at end of file diff --git a/assessment_module_manager/modules.ini b/assessment_module_manager/modules.ini index 73fd4c91b..f69206071 100644 --- a/assessment_module_manager/modules.ini +++ b/assessment_module_manager/modules.ini @@ -22,3 +22,8 @@ supports_evaluation = false url = http://localhost:5005 type = programming supports_evaluation = false + +[module_programming_ast] +url = http://localhost:5006 +type = programming +supports_evaluation = false diff --git a/athena-workspace.code-workspace b/athena-workspace.code-workspace index 193fe2222..638fca66f 100644 --- a/athena-workspace.code-workspace +++ b/athena-workspace.code-workspace @@ -27,6 +27,9 @@ { "path": "module_programming_themisml" }, + { + "path": "module_programming_ast" + }, ], "settings": { "python.linting.prospectorEnabled": true, diff --git a/docker-compose.prod.yml b/docker-compose.prod.yml index 2c20363e6..236b159f0 100644 --- a/docker-compose.prod.yml +++ b/docker-compose.prod.yml @@ -25,7 +25,7 @@ services: module_example: hostname: module-example env_file: - - ${ATHENA_ENV_DIR:-./env_example}/module_example.env + - ${ATHENA_ENV_DIR:-./env_example}/module_programming_ast.env depends_on: - postgres image: ls1tum/athena_module_example:${ATHENA_TAG:-develop} @@ -60,6 +60,14 @@ services: - postgres image: ls1tum/athena_module_programming_themisml:${ATHENA_TAG:-develop} + module_programming_ast: + hostname: module-programming-ast + env_file: + - ${ATHENA_ENV_DIR:-./env_example}/module_programming_ast.env + depends_on: + - postgres + image: ls1tum/athena_module_programming_ast:${ATHENA_TAG:-develop} + postgres: hostname: postgres image: postgres:15 @@ -71,6 +79,5 @@ services: ports: - "5432:5432" - volumes: postgres_data: diff --git a/docker-compose.yml b/docker-compose.yml index 6cfe81553..0066cd2b2 100644 --- a/docker-compose.yml +++ b/docker-compose.yml @@ -54,3 +54,12 @@ services: - athena ports: - "5005:5005" + + module_programming_ast: + hostname: module-programming-ast + build: ./module_programming_ast + depends_on: + - athena + ports: + - "5006:5006" + diff --git a/env_example/module_programming_ast.env b/env_example/module_programming_ast.env new file mode 100644 index 000000000..209f50dda --- /dev/null +++ b/env_example/module_programming_ast.env @@ -0,0 +1,3 @@ +PRODUCTION=1 +SECRET=12345abcdef +DATABASE_URL=postgresql://postgres:password@postgres:5432/athena diff --git a/module_programming_ast/.dockerignore b/module_programming_ast/.dockerignore new file mode 100644 index 000000000..892b6a92a --- /dev/null +++ b/module_programming_ast/.dockerignore @@ -0,0 +1,4 @@ +.venv +.vscode +__pycache__ +.DS_Store \ No newline at end of file diff --git a/module_programming_ast/.vscode/settings.json b/module_programming_ast/.vscode/settings.json new file mode 100644 index 000000000..9a77d359f --- /dev/null +++ b/module_programming_ast/.vscode/settings.json @@ -0,0 +1,4 @@ +{ + "python.pythonPath": "./.venv/bin/python", + "python.analysis.typeCheckingMode": "basic", +} \ No newline at end of file diff --git a/module_programming_ast/Dockerfile b/module_programming_ast/Dockerfile new file mode 100644 index 000000000..d45be66f0 --- /dev/null +++ b/module_programming_ast/Dockerfile @@ -0,0 +1,29 @@ +# syntax=docker/dockerfile:1 + +# This is the Dockerfile for the module_programming_ast. + +FROM python:3.11 +LABEL org.opencontainers.image.source=https://github.com/ls1intum/Athena + +# Environment variable Python in Docker +ENV PYTHONUNBUFFERED=1 + +WORKDIR /code + +# Poetry +RUN pip install --no-cache-dir poetry==1.5.0 + +# Dependencies +COPY pyproject.toml poetry.lock ./ +# athena module (from the Dockerfile in the athena folder) +COPY --from=athena /code /athena +# install dependencies +RUN poetry config virtualenvs.create true \ + && poetry config virtualenvs.in-project true \ + && poetry install --no-interaction --no-ansi + +# Project files +COPY . ./ + +# poetry scripts don't work here +CMD poetry run python -m module_* \ No newline at end of file diff --git a/module_programming_ast/README.md b/module_programming_ast/README.md new file mode 100644 index 000000000..0bed60b25 --- /dev/null +++ b/module_programming_ast/README.md @@ -0,0 +1,8 @@ +# Start Directly +`poetry run module` + +# Start with Docker +`docker-compose up --build` + +# Start with Docker in Production Mode +`docker-compose up --env-file .env.production --build` \ No newline at end of file diff --git a/module_programming_ast/module.conf b/module_programming_ast/module.conf new file mode 100644 index 000000000..5f9365e23 --- /dev/null +++ b/module_programming_ast/module.conf @@ -0,0 +1,4 @@ +[module] +name = module_programming_ast +type = programming +port = 5006 diff --git a/module_programming_ast/module_programming_ast/__init__.py b/module_programming_ast/module_programming_ast/__init__.py new file mode 100644 index 000000000..e69de29bb diff --git a/module_programming_ast/module_programming_ast/__main__.py b/module_programming_ast/module_programming_ast/__main__.py new file mode 100644 index 000000000..93bcaecc9 --- /dev/null +++ b/module_programming_ast/module_programming_ast/__main__.py @@ -0,0 +1,169 @@ +""" +Entry point for the module_programming_ast module. +""" +import random +from typing import List, Any +from pydantic import BaseModel, Field + +from athena import app, config_schema_provider, submissions_consumer, submission_selector, feedback_consumer, feedback_provider, evaluation_provider, emit_meta +from athena.programming import Exercise, Submission, Feedback +from athena.logger import logger +from athena.storage import store_exercise, store_submissions, store_feedback + + +@config_schema_provider +class Configuration(BaseModel): + """Example configuration for the module_programming_ast module.""" + debug: bool = Field(False, description="Whether the module is in **debug mode**. This is an example config option.") + + +@submissions_consumer +def receive_submissions(exercise: Exercise, submissions: List[Submission], module_config: Configuration): + logger.info("receive_submissions: Received %d submissions for exercise %d", len(submissions), exercise.id) + for submission in submissions: + logger.info("- Submission %d", submission.id) + zip_content = submission.get_zip() + # list the files in the zip + for file in zip_content.namelist(): + logger.info(" - %s", file) + # Do something with the submissions + logger.info("Doing stuff") + + # Example use module config + # If you are not using module_config for your module, you can remove it from the function signature + logger.info("Config: %s", module_config) + if module_config.debug: + emit_meta('debug', True) + emit_meta('comment', 'You can add any metadata you want here') + + # Add data to exercise + exercise.meta["some_data"] = "some_value" + logger.info("- Exercise meta: %s", exercise.meta) + + # Add data to submission + for submission in submissions: + submission.meta["some_data"] = "some_value" + logger.info("- Submission %d meta: %s", submission.id, submission.meta) + + store_exercise(exercise) + store_submissions(submissions) + + +@submission_selector +def select_submission(exercise: Exercise, submissions: List[Submission]) -> Submission: + logger.info("select_submission: Received %d submissions for exercise %d", len(submissions), exercise.id) + for submission in submissions: + logger.info("- Submission %d", submission.id) + # Do something with the submissions and return the one that should be assessed next + return submissions[0] + + +@feedback_consumer +def process_incoming_feedback(exercise: Exercise, submission: Submission, feedbacks: List[Feedback]): + logger.info("process_feedback: Received feedbacks for submission %d of exercise %d", submission.id, exercise.id) + logger.info("process_feedback: Feedbacks: %s", feedbacks) + # Do something with the feedback + # Add data to feedback + for feedback in feedbacks: + feedback.meta["some_data"] = "some_value" + store_feedback(feedback) + + +@feedback_provider +def suggest_feedback(exercise: Exercise, submission: Submission, module_config: Configuration) -> List[Feedback]: + logger.info("suggest_feedback: Suggestions for submission %d of exercise %d were requested", submission.id, exercise.id) + # Do something with the submission and return a list of feedback + + # Example use of module config + # If you are not using module_config for your module, you can remove it from the function signature + logger.info("Config: %s", module_config) + if module_config.debug: + emit_meta("costs", "100.00€") + + return [ + # Referenced feedback, line 8-9 in BinarySearch.java + Feedback( + id=None, + exercise_id=exercise.id, + submission_id=submission.id, + title="This is a suggestion.", + description="There is something wrong here.", + credits=-1.0, + file_path="BinarySearch.java", + line_start=8, + line_end=9, + structured_grading_instruction_id=None, + meta={} + ), + # Referenced feedback, line 13-18 in BinarySearch.java + Feedback( + id=None, + exercise_id=exercise.id, + submission_id=submission.id, + title="This is a second suggestion.", + description="This is very good!", + credits=2.0, + file_path="BinarySearch.java", + line_start=13, + line_end=18, + structured_grading_instruction_id=None, + meta={} + ), + # Unreferenced feedback without file + Feedback( + id=None, + exercise_id=exercise.id, + submission_id=submission.id, + title="This is an unreferenced suggestion.", + description="General feedback without any reference to the submission.", + credits=0.0, + file_path=None, + line_start=None, + line_end=None, + structured_grading_instruction_id=None, + meta={} + ), + # Unreferenced feedback in BinarySearch.java + Feedback( + id=None, + exercise_id=exercise.id, + submission_id=submission.id, + title="This is an unreferenced suggestion in a file.", + description="General feedback with only the reference to a file (BinarySearch.java)", + credits=0.0, + file_path="BinarySearch.java", + line_start=None, + line_end=None, + structured_grading_instruction_id=None, + meta={} + ) + ] + + +# Only if it makes sense for a module (Optional) +@evaluation_provider +def evaluate_feedback(exercise: Exercise, submission: Submission, true_feedbacks: List[Feedback], predicted_feedbacks: List[Feedback]) -> Any: + logger.info( + "evaluate_feedback: Evaluation for submission %d of exercise %d was requested with %d true and %d predicted feedbacks", + submission.id, exercise.id, len(true_feedbacks), len(predicted_feedbacks) + ) + + # Do something with the true and predicted feedback and return the evaluation result + # Generate some example evaluation result + evaluation_results = [] + true_feedback_embeddings = [random.random() for _ in true_feedbacks] + predicted_feedback_embeddings = [random.random() for _ in predicted_feedbacks] + for feedback, embedding in zip(predicted_feedbacks, predicted_feedback_embeddings): + feedback_evaluation = { + "feedback_id": feedback.id, + "embedding": embedding, + "has_match": len([t for t in true_feedback_embeddings if abs(t - embedding) < 0.1]) > 0, + "correctness": random.random() + } + evaluation_results.append(feedback_evaluation) + + return evaluation_results + + +if __name__ == "__main__": + app.start() diff --git a/module_programming_ast/poetry.lock b/module_programming_ast/poetry.lock new file mode 100644 index 000000000..9f56be0a2 --- /dev/null +++ b/module_programming_ast/poetry.lock @@ -0,0 +1,559 @@ +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. + +[[package]] +name = "anyio" +version = "4.2.0" +description = "High level compatibility layer for multiple asynchronous event loop implementations" +optional = false +python-versions = ">=3.8" +files = [ + {file = "anyio-4.2.0-py3-none-any.whl", hash = "sha256:745843b39e829e108e518c489b31dc757de7d2131d53fac32bd8df268227bfee"}, + {file = "anyio-4.2.0.tar.gz", hash = "sha256:e1875bb4b4e2de1669f4bc7869b6d3f54231cdced71605e6e64c9be77e3be50f"}, +] + +[package.dependencies] +idna = ">=2.8" +sniffio = ">=1.1" + +[package.extras] +doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"] +test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"] +trio = ["trio (>=0.23)"] + +[[package]] +name = "athena" +version = "1.0.0" +description = "This is a helper module for easier development of Athena modules. 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module." +authors = ["Marlon Bucciarelli "] +license = "MIT" + +[tool.poetry.dependencies] +python = "3.11.*" +athena = {path = "../athena", develop = true} + +[tool.poetry.scripts] +module = "athena:run_module" + +[build-system] +requires = ["poetry-core>=1.0.0"] +build-backend = "poetry.core.masonry.api" diff --git a/module_programming_themisml/Dockerfile b/module_programming_themisml/Dockerfile index 3b2c891f9..0ce8ca5c5 100644 --- a/module_programming_themisml/Dockerfile +++ b/module_programming_themisml/Dockerfile @@ -1,6 +1,6 @@ # syntax=docker/dockerfile:1 -# This is the Dockerfile for the module_example. +# This is the Dockerfile for the module_programming_ast. # Pytorch CPU version is not yet available for Python 3.12 FROM python:3.11 diff --git a/pyproject.toml b/pyproject.toml index 6f35cf23b..9331c16fc 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -18,7 +18,7 @@ module_programming_llm = {path = "./module_programming_llm", develop = true} module_text_llm = {path = "./module_text_llm", develop = true} module_text_cofee = {path = "./module_text_cofee", develop = true} module_programming_themisml = {path = "./module_programming_themisml", develop = true} - +module_programming_ast = {path = "./module_programming_ast", develop = true} # start linter with `poetry run prospector` [tool.poetry.group.dev.dependencies]