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update workflow

update workflow #41

Triggered via push September 7, 2025 13:20
Status Failure
Total duration 8m 9s
Artifacts

check-bioc.yml

on: push
Matrix: build-check
docker-build-and-push
0s
docker-build-and-push
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10 errors, 9 warnings, and 1 notice
macOS-latest (4.5)
Process completed with exit code 1.
macOS-latest (4.5)
Vignette re-building failed.
macOS-latest (4.5)
processing vignette 'intro.Rmd' failed with diagnostics:
macOS-latest (4.5)
Failed to install 'txcutr' from local:
macOS-latest (4.5)
--- re-building ‘intro.Rmd’ using rmarkdown
windows-latest (4.5)
Process completed with exit code 1.
windows-latest (4.5)
Failed to install 'txcutr' from local:
windows-latest (4.5)
Vignette re-building failed.
windows-latest (4.5)
processing vignette 'intro.Rmd' failed with diagnostics:
ubuntu-latest (4.5)
Process completed with exit code 1.
macOS-latest (4.5)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (4.5)
unable to access index for repository https://bioconductor.org/packages/3.22/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (4.5)
unable to access index for repository https://bioconductor.org/packages/3.22/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (4.5)
unable to access index for repository https://bioconductor.org/packages/3.22/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (4.5)
unable to access index for repository https://bioconductor.org/packages/3.22/data/experiment/bin/macosx/big-sur-arm64/contrib/4.5:
macOS-latest (4.5)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (4.5)
harfbuzz 11.4.4 is already installed and up-to-date. To reinstall 11.4.4, run: brew reinstall harfbuzz
windows-latest (4.5)
No files were found with the provided path: check. No artifacts will be uploaded.
ubuntu-latest (4.5)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (4.5)
The windows-latest label will migrate from Windows Server 2022 to Windows Server 2025 beginning September 2, 2025. For more information see https://github.com/actions/runner-images/issues/12677