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I am getting the following error message. The input is attached (.txt suffix instead of .fna so that Github lets me attach the file).
niklas@niklas-Zenbook:~/code/CONSENT$ ./CONSENT-correct --in reads.fna --out example/correctedReads.fasta --type ONT [ti 1.11.2022 14.52.44 +0200] Overlapping the long reads (minimap2) [ti 1.11.2022 14.52.44 +0200] Correcting the long reads malloc(): corrupted top size ./CONSENT-correct: line 202: 14609 Aborted (core dumped) $LRSCf/bin/CONSENT-correction -a $tmpdir/"$alignments" -s "$minSupport" -S "$maxSupport" -l "$windowSize" -k "$merSize" -c "$commonKMers" -A "$minAnchors" -f "$solid" -m "$windowOverlap" -j "$nproc" -r "$reads" -M "$maxMSA" -p "$LRSCf" >> "$out"
reads.txt
The text was updated successfully, but these errors were encountered:
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I am getting the following error message. The input is attached (.txt suffix instead of .fna so that Github lets me attach the file).
reads.txt
The text was updated successfully, but these errors were encountered: