neurostore_sdk.StudiesApi

All URIs are relative to https://neurostore.org/api

Method	HTTP request	Description
base_studies_get	GET /base-studies/
base_studies_id_get	GET /base-studies/{id}	Your GET endpoint
base_studies_id_put	PUT /base-studies/{id}
base_studies_post	POST /base-studies/
studies_get	GET /studies/	GET a list of studies
studies_id_delete	DELETE /studies/{id}	DELETE a study
studies_id_get	GET /studies/{id}	GET a study
studies_id_put	PUT /studies/{id}	PUT/update a study
studies_post	POST /studies/	POST/create a study

base_studies_get

BaseStudyList base_studies_get(feature_filter=feature_filter, pipeline_config=pipeline_config, feature_display=feature_display, feature_flatten=feature_flatten, search=search, sort=sort, page=page, desc=desc, page_size=page_size, name=name, description=description, authors=authors, level=level, data_type=data_type, publication=publication, pmid=pmid, doi=doi, flat=flat, info=info)

Example

Bearer Authentication (JSON-Web-Token):

import neurostore_sdk
from neurostore_sdk.models.base_study_list import BaseStudyList
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)

# The client must configure the authentication and authorization parameters
# in accordance with the API server security policy.
# Examples for each auth method are provided below, use the example that
# satisfies your auth use case.

# Configure Bearer authorization: JSON-Web-Token
configuration = neurostore_sdk.Configuration(
    access_token = os.environ["BEARER_TOKEN"]
)

# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    feature_filter = ['feature_filter_example'] # List[str] | Filter studies by feature content. Format: \"PipelineName[:version]:field_path=value\". Examples:   - \"TestPipeline:1.0.0:predictions.age_mean>20\" (specific version)   - \"TestPipeline:groups.diagnosis=ADHD\" (latest version)  Field path supports array notation with [], regex search with ~, and comparisons with =, >, <, >=, <=.  (optional)
    pipeline_config = ['pipeline_config_example'] # List[str] | Filter studies by pipeline config content. Format: \"PipelineName[:version]:config_path=value\". Examples:   - \"TestPipeline:1.0.0:settings.min_age=20\" (specific version)   - \"TestPipeline:model.type=linear\" (latest version)  Config path supports array notation with [], regex search with ~, and comparisons with =, >, <, >=, <=.  (optional)
    feature_display = 'feature_display_example' # str | display features from pipelines (optional)
    feature_flatten = True # bool |  (optional)
    search = 'imagin' # str | search for entries that contain the substring (optional)
    sort = 'created_at' # str | Parameter to sort results on (optional) (default to 'created_at')
    page = 56 # int | page of results (optional)
    desc = True # bool | sort results by descending order (as opposed to ascending order) (optional)
    page_size = 56 # int | number of results to show on a page (optional)
    name = 'name_example' # str | search the name field for a term (optional)
    description = 'description_example' # str | search description field for a term (optional)
    authors = 'authors_example' # str | search authors (optional)
    level = group # str | select between studies with group results or meta results (optional) (default to group)
    data_type = 'data_type_example' # str | whether searching for studies that contain coordinates, images, or both (optional)
    publication = 'publication_example' # str | search for papers from a particular journal (optional)
    pmid = 'pmid_example' # str | search for particular pmid (optional)
    doi = 'doi_example' # str | search for study with specific doi (optional)
    flat = True # bool | do not return any embedded relationships. When set, it is incompatible with nested.  (optional)
    info = True # bool | show additional for endpoint-object relationships without being fully nested. Incompatible with nested (optional)

    try:
        # 
        api_response = api_instance.base_studies_get(feature_filter=feature_filter, pipeline_config=pipeline_config, feature_display=feature_display, feature_flatten=feature_flatten, search=search, sort=sort, page=page, desc=desc, page_size=page_size, name=name, description=description, authors=authors, level=level, data_type=data_type, publication=publication, pmid=pmid, doi=doi, flat=flat, info=info)
        print("The response of StudiesApi->base_studies_get:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->base_studies_get: %s\n" % e)

Parameters

Name	Type	Description	Notes
feature_filter	List[str]	Filter studies by feature content. Format: "PipelineName[:version]:field_path=value". Examples: - "TestPipeline:1.0.0:predictions.age_mean>20" (specific version) - "TestPipeline:groups.diagnosis=ADHD" (latest version) Field path supports array notation with [], regex search with ~, and comparisons with =, >, <, >=, <=.	[optional]
pipeline_config	List[str]	Filter studies by pipeline config content. Format: "PipelineName[:version]:config_path=value". Examples: - "TestPipeline:1.0.0:settings.min_age=20" (specific version) - "TestPipeline:model.type=linear" (latest version) Config path supports array notation with [], regex search with ~, and comparisons with =, >, <, >=, <=.	[optional]
feature_display	str	display features from pipelines	[optional]
feature_flatten	bool		[optional]
search	str	search for entries that contain the substring	[optional]
sort	str	Parameter to sort results on	[optional] [default to 'created_at']
page	int	page of results	[optional]
desc	bool	sort results by descending order (as opposed to ascending order)	[optional]
page_size	int	number of results to show on a page	[optional]
name	str	search the name field for a term	[optional]
description	str	search description field for a term	[optional]
authors	str	search authors	[optional]
level	str	select between studies with group results or meta results	[optional] [default to group]
data_type	str	whether searching for studies that contain coordinates, images, or both	[optional]
publication	str	search for papers from a particular journal	[optional]
pmid	str	search for particular pmid	[optional]
doi	str	search for study with specific doi	[optional]
flat	bool	do not return any embedded relationships. When set, it is incompatible with nested.	[optional]
info	bool	show additional for endpoint-object relationships without being fully nested. Incompatible with nested	[optional]

Return type

BaseStudyList

Authorization

JSON-Web-Token

HTTP request headers

Content-Type: Not defined
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	OK	-

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base_studies_id_get

BaseStudyReturn base_studies_id_get(id, flat=flat, info=info)

Your GET endpoint

Example

import neurostore_sdk
from neurostore_sdk.models.base_study_return import BaseStudyReturn
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)


# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    id = 'id_example' # str | 
    flat = True # bool | do not return any embedded relationships. When set, it is incompatible with nested.  (optional)
    info = True # bool | show additional for endpoint-object relationships without being fully nested. Incompatible with nested (optional)

    try:
        # Your GET endpoint
        api_response = api_instance.base_studies_id_get(id, flat=flat, info=info)
        print("The response of StudiesApi->base_studies_id_get:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->base_studies_id_get: %s\n" % e)

Parameters

Name	Type	Description	Notes
id	str
flat	bool	do not return any embedded relationships. When set, it is incompatible with nested.	[optional]
info	bool	show additional for endpoint-object relationships without being fully nested. Incompatible with nested	[optional]

Return type

BaseStudyReturn

Authorization

No authorization required

HTTP request headers

Content-Type: Not defined
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	OK	-

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base_studies_id_put

BaseStudyReturn base_studies_id_put(id, base_study=base_study)

Example

Bearer Authentication (JSON-Web-Token):

import neurostore_sdk
from neurostore_sdk.models.base_study import BaseStudy
from neurostore_sdk.models.base_study_return import BaseStudyReturn
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)

# The client must configure the authentication and authorization parameters
# in accordance with the API server security policy.
# Examples for each auth method are provided below, use the example that
# satisfies your auth use case.

# Configure Bearer authorization: JSON-Web-Token
configuration = neurostore_sdk.Configuration(
    access_token = os.environ["BEARER_TOKEN"]
)

# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    id = 'id_example' # str | 
    base_study = neurostore_sdk.BaseStudy() # BaseStudy |  (optional)

    try:
        # 
        api_response = api_instance.base_studies_id_put(id, base_study=base_study)
        print("The response of StudiesApi->base_studies_id_put:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->base_studies_id_put: %s\n" % e)

Parameters

Name	Type	Description	Notes
id	str
base_study	BaseStudy		[optional]

Return type

BaseStudyReturn

Authorization

JSON-Web-Token

HTTP request headers

Content-Type: application/json
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	OK	-

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base_studies_post

BaseStudiesPost200Response base_studies_post(base_studies_post_request=base_studies_post_request)

Example

Bearer Authentication (JSON-Web-Token):

import neurostore_sdk
from neurostore_sdk.models.base_studies_post200_response import BaseStudiesPost200Response
from neurostore_sdk.models.base_studies_post_request import BaseStudiesPostRequest
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)

# The client must configure the authentication and authorization parameters
# in accordance with the API server security policy.
# Examples for each auth method are provided below, use the example that
# satisfies your auth use case.

# Configure Bearer authorization: JSON-Web-Token
configuration = neurostore_sdk.Configuration(
    access_token = os.environ["BEARER_TOKEN"]
)

# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    base_studies_post_request = neurostore_sdk.BaseStudiesPostRequest() # BaseStudiesPostRequest |  (optional)

    try:
        # 
        api_response = api_instance.base_studies_post(base_studies_post_request=base_studies_post_request)
        print("The response of StudiesApi->base_studies_post:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->base_studies_post: %s\n" % e)

Parameters

Name	Type	Description	Notes
base_studies_post_request	BaseStudiesPostRequest		[optional]

Return type

BaseStudiesPost200Response

Authorization

JSON-Web-Token

HTTP request headers

Content-Type: application/json
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	OK	-

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studies_get

StudyList studies_get(search=search, sort=sort, page=page, desc=desc, page_size=page_size, nested=nested, name=name, description=description, source_id=source_id, unique=unique, source=source, authors=authors, user_id=user_id, data_type=data_type, studyset_owner=studyset_owner, level=level, pmid=pmid, doi=doi, flat=flat)

GET a list of studies

List studies

Example

Bearer Authentication (JSON-Web-Token):

import neurostore_sdk
from neurostore_sdk.models.study_list import StudyList
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)

# The client must configure the authentication and authorization parameters
# in accordance with the API server security policy.
# Examples for each auth method are provided below, use the example that
# satisfies your auth use case.

# Configure Bearer authorization: JSON-Web-Token
configuration = neurostore_sdk.Configuration(
    access_token = os.environ["BEARER_TOKEN"]
)

# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    search = 'imagin' # str | search for entries that contain the substring (optional)
    sort = 'created_at' # str | Parameter to sort results on (optional) (default to 'created_at')
    page = 56 # int | page of results (optional)
    desc = True # bool | sort results by descending order (as opposed to ascending order) (optional)
    page_size = 56 # int | number of results to show on a page (optional)
    nested = True # bool | whether to show the URI to a resource (false) or to embed the object in the response (true) (optional)
    name = 'name_example' # str | search the name field for a term (optional)
    description = 'description_example' # str | search description field for a term (optional)
    source_id = '1234567890ab' # str | id of the resource you are either filtering/copying on (optional)
    unique = None # object | whether to list clones with originals (optional)
    source = neurostore # str | the source of the resource you would like to filter/copy from (optional) (default to neurostore)
    authors = 'authors_example' # str | search authors (optional)
    user_id = 'user_id_example' # str | user id you want to filter by (optional)
    data_type = 'data_type_example' # str | whether searching for studies that contain coordinates, images, or both (optional)
    studyset_owner = 'studyset_owner_example' # str | for all studies filter which studysets are listed based on who owns the studyset (optional)
    level = group # str | select between studies with group results or meta results (optional) (default to group)
    pmid = 'pmid_example' # str | search for particular pmid (optional)
    doi = 'doi_example' # str | search for study with specific doi (optional)
    flat = True # bool | do not return any embedded relationships. When set, it is incompatible with nested.  (optional)

    try:
        # GET a list of studies
        api_response = api_instance.studies_get(search=search, sort=sort, page=page, desc=desc, page_size=page_size, nested=nested, name=name, description=description, source_id=source_id, unique=unique, source=source, authors=authors, user_id=user_id, data_type=data_type, studyset_owner=studyset_owner, level=level, pmid=pmid, doi=doi, flat=flat)
        print("The response of StudiesApi->studies_get:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->studies_get: %s\n" % e)

Parameters

Name	Type	Description	Notes
search	str	search for entries that contain the substring	[optional]
sort	str	Parameter to sort results on	[optional] [default to 'created_at']
page	int	page of results	[optional]
desc	bool	sort results by descending order (as opposed to ascending order)	[optional]
page_size	int	number of results to show on a page	[optional]
nested	bool	whether to show the URI to a resource (false) or to embed the object in the response (true)	[optional]
name	str	search the name field for a term	[optional]
description	str	search description field for a term	[optional]
source_id	str	id of the resource you are either filtering/copying on	[optional]
unique	object	whether to list clones with originals	[optional]
source	str	the source of the resource you would like to filter/copy from	[optional] [default to neurostore]
authors	str	search authors	[optional]
user_id	str	user id you want to filter by	[optional]
data_type	str	whether searching for studies that contain coordinates, images, or both	[optional]
studyset_owner	str	for all studies filter which studysets are listed based on who owns the studyset	[optional]
level	str	select between studies with group results or meta results	[optional] [default to group]
pmid	str	search for particular pmid	[optional]
doi	str	search for study with specific doi	[optional]
flat	bool	do not return any embedded relationships. When set, it is incompatible with nested.	[optional]

Return type

StudyList

Authorization

JSON-Web-Token

HTTP request headers

Content-Type: Not defined
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	OK	-

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studies_id_delete

studies_id_delete(id)

DELETE a study

delete a study

Example

Bearer Authentication (JSON-Web-Token):

import neurostore_sdk
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)

# The client must configure the authentication and authorization parameters
# in accordance with the API server security policy.
# Examples for each auth method are provided below, use the example that
# satisfies your auth use case.

# Configure Bearer authorization: JSON-Web-Token
configuration = neurostore_sdk.Configuration(
    access_token = os.environ["BEARER_TOKEN"]
)

# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    id = 'id_example' # str | 

    try:
        # DELETE a study
        api_instance.studies_id_delete(id)
    except Exception as e:
        print("Exception when calling StudiesApi->studies_id_delete: %s\n" % e)

Parameters

Name	Type	Description	Notes
id	str

Return type

void (empty response body)

Authorization

JSON-Web-Token

HTTP request headers

Content-Type: Not defined
Accept: Not defined

HTTP response details

Status code	Description	Response headers
200	OK	-

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studies_id_get

StudyReturn studies_id_get(id, nested=nested, studyset_owner=studyset_owner, flat=flat)

GET a study

Get a study.

Example

import neurostore_sdk
from neurostore_sdk.models.study_return import StudyReturn
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)


# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    id = 'id_example' # str | 
    nested = True # bool | whether to show the URI to a resource (false) or to embed the object in the response (true) (optional)
    studyset_owner = 'studyset_owner_example' # str | for all studies filter which studysets are listed based on who owns the studyset (optional)
    flat = True # bool | do not return any embedded relationships. When set, it is incompatible with nested.  (optional)

    try:
        # GET a study
        api_response = api_instance.studies_id_get(id, nested=nested, studyset_owner=studyset_owner, flat=flat)
        print("The response of StudiesApi->studies_id_get:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->studies_id_get: %s\n" % e)

Parameters

Name	Type	Description	Notes
id	str
nested	bool	whether to show the URI to a resource (false) or to embed the object in the response (true)	[optional]
studyset_owner	str	for all studies filter which studysets are listed based on who owns the studyset	[optional]
flat	bool	do not return any embedded relationships. When set, it is incompatible with nested.	[optional]

Return type

StudyReturn

Authorization

No authorization required

HTTP request headers

Content-Type: Not defined
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	Study Found	-
404	Example response	-

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studies_id_put

StudyReturn studies_id_put(id, study_request=study_request)

PUT/update a study

Update a study.

Example

Bearer Authentication (JSON-Web-Token):

import neurostore_sdk
from neurostore_sdk.models.study_request import StudyRequest
from neurostore_sdk.models.study_return import StudyReturn
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)

# The client must configure the authentication and authorization parameters
# in accordance with the API server security policy.
# Examples for each auth method are provided below, use the example that
# satisfies your auth use case.

# Configure Bearer authorization: JSON-Web-Token
configuration = neurostore_sdk.Configuration(
    access_token = os.environ["BEARER_TOKEN"]
)

# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    id = 'id_example' # str | 
    study_request = neurostore_sdk.StudyRequest() # StudyRequest |  (optional)

    try:
        # PUT/update a study
        api_response = api_instance.studies_id_put(id, study_request=study_request)
        print("The response of StudiesApi->studies_id_put:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->studies_id_put: %s\n" % e)

Parameters

Name	Type	Description	Notes
id	str
study_request	StudyRequest		[optional]

Return type

StudyReturn

Authorization

JSON-Web-Token

HTTP request headers

Content-Type: application/json
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	OK	-
422	Example response	-

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studies_post

StudyReturn studies_post(source=source, source_id=source_id, study_request=study_request)

POST/create a study

Create a study

Example

Bearer Authentication (JSON-Web-Token):

import neurostore_sdk
from neurostore_sdk.models.study_request import StudyRequest
from neurostore_sdk.models.study_return import StudyReturn
from neurostore_sdk.rest import ApiException
from pprint import pprint

# Defining the host is optional and defaults to https://neurostore.org/api
# See configuration.py for a list of all supported configuration parameters.
configuration = neurostore_sdk.Configuration(
    host = "https://neurostore.org/api"
)

# The client must configure the authentication and authorization parameters
# in accordance with the API server security policy.
# Examples for each auth method are provided below, use the example that
# satisfies your auth use case.

# Configure Bearer authorization: JSON-Web-Token
configuration = neurostore_sdk.Configuration(
    access_token = os.environ["BEARER_TOKEN"]
)

# Enter a context with an instance of the API client
with neurostore_sdk.ApiClient(configuration) as api_client:
    # Create an instance of the API class
    api_instance = neurostore_sdk.StudiesApi(api_client)
    source = neurostore # str | the source of the resource you would like to filter/copy from (optional) (default to neurostore)
    source_id = '1234567890ab' # str | id of the resource you are either filtering/copying on (optional)
    study_request = neurostore_sdk.StudyRequest() # StudyRequest |  (optional)

    try:
        # POST/create a study
        api_response = api_instance.studies_post(source=source, source_id=source_id, study_request=study_request)
        print("The response of StudiesApi->studies_post:\n")
        pprint(api_response)
    except Exception as e:
        print("Exception when calling StudiesApi->studies_post: %s\n" % e)

Parameters

Name	Type	Description	Notes
source	str	the source of the resource you would like to filter/copy from	[optional] [default to neurostore]
source_id	str	id of the resource you are either filtering/copying on	[optional]
study_request	StudyRequest		[optional]

Return type

StudyReturn

Authorization

JSON-Web-Token

HTTP request headers

Content-Type: application/json
Accept: application/json

HTTP response details

Status code	Description	Response headers
200	OK	-

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StudiesApi.md

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StudiesApi.md

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neurostore_sdk.StudiesApi

base_studies_get

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

base_studies_id_get

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

base_studies_id_put

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

base_studies_post

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

studies_get

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

studies_id_delete

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

studies_id_get

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

studies_id_put

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details

studies_post

Example

Parameters

Return type

Authorization

HTTP request headers

HTTP response details