Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Potential improvement to Nextflow for Genomics #518

Open
vdauwera opened this issue Feb 19, 2025 · 0 comments
Open

Potential improvement to Nextflow for Genomics #518

vdauwera opened this issue Feb 19, 2025 · 0 comments
Labels
improve New feature or request nf4 science

Comments

@vdauwera
Copy link
Collaborator

Suggested in a previous PR, saving here in case it's useful for the Genomics rewrite:

This is the equivalent splitCsv():

reads_ch = Channel.fromPath(params.reads_bam)
                .splitCsv()
                .map { bamPath -> file(bamPath[0]) }

I think it looks nicer

Originally posted by @adamrtalbot in #438 (comment)
@vdauwera vdauwera added improve New feature or request nf4 science labels Feb 19, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
improve New feature or request nf4 science
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@vdauwera