Merge pull request #442 from nextstrain/update-trigger-rebuild

trigger_rebuild_pipeline: Update inputs to match ncov builds
nextstrain · Mar 6, 2024 · 1d3a131 · 1d3a131
2 parents d06e653 + a19668d
commit 1d3a131
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/workflow/snakemake_rules/trigger.smk b/workflow/snakemake_rules/trigger.smk
@@ -14,8 +14,8 @@ These output files are empty flag files to force Snakemake to run the trigger ru
 rule trigger_rebuild_pipeline:
     message: "Triggering nextstrain/ncov rebuild action (via repository dispatch)"
     input:
-        metadata_upload = f"data/{database}/metadata.tsv.gz.upload",
-        fasta_upload = f"data/{database}/sequences.fasta.xz.upload",
+        metadata_upload = f"data/{database}/metadata.tsv.zst.upload",
+        fasta_upload = f"data/{database}/aligned.fasta.zst.upload",
     output:
         touch(f"data/{database}/trigger-rebuild.done")
     params: