diff --git a/docs/parameters.md b/docs/parameters.md index 498f8213..65da21a8 100644 --- a/docs/parameters.md +++ b/docs/parameters.md @@ -66,7 +66,7 @@ Parameters that define how the pipeline works | `automap_repeats` | BED file with repeat regions in the genome.
HelpThis file will be automatically generated for hg38/GRCh38 and hg19/GRCh37 when this parameter has not been given.
| `string` | | | | | `automap_panel` | TXT file with gene panel regions to be used by AutoMap.
HelpBy default the CMGG gene panel list will be used.
| `string` | | | | | `automap_panel_name` | The panel name of the panel given with --automap_panel. | `string` | cmgg_bio | | | -| `hc_phasing` | Perform phasing with HaplotypeCaller | `boolean` | | | | +| `hc_phasing` | Perform phasing with HaplotypeCaller | `boolean` | | | | ## Institutional config options