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Drive reference data and resource file data staging through CLI option #131

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scwatts opened this issue Feb 10, 2025 · 1 comment
Open

Drive reference data and resource file data staging through CLI option #131

scwatts opened this issue Feb 10, 2025 · 1 comment
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@luan-n-nguyen
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enhancement New feature or request

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@scwatts
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scwatts commented Feb 10, 2025

Description of feature

  • currently the reference data / resource file staging feature is partial driven by the composition of the samplesheet
  • specifically, only files required to analyse data in the samplesheet will be retrieved or prepared
  • this approach is efficient in terms of implementation but is not particularly intuitive for users
  • selection of reference data / resource files to retrieve should instead be driven by a CLI argument
@scwatts scwatts added the enhancement New feature or request label Feb 10, 2025
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scwatts commented Feb 10, 2025 •
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@luan-n-nguyen let's separate development for this enhancement in a new branch to avoid complications with the changes WiGiTS v6.0

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