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missing gene identifiers #58

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raynamharris opened this issue Aug 19, 2022 · 0 comments
Open

missing gene identifiers #58

raynamharris opened this issue Aug 19, 2022 · 0 comments

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@raynamharris
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the gene reference file that provides information about gene alias is missing information for a lot of genes even thought this information in theory exists.

For example: ENSG00000133136 GNG5P2

Running with term: gene
Using output dir output_pieces_gene/00-alias for pieces.
Loaded 24620 reference IDs from data/validate/ensembl_genes.tsv
Loaded 19971 IDs from data/inputs/STAGING_PORTAL__available_genes__2022-08-19.txt
WARNING: missing markdown for identifier ENSG00000133136
WARNING: missing markdown for identifier ENSG00000166984
WARNING: missing markdown for identifier ENSG00000171570
WARNING: missing markdown for identifier ENSG00000172014
WARNING: missing markdown for identifier ENSG00000181017
WARNING: missing markdown for identifier ENSG00000182652
WARNING: missing markdown for identifier ENSG00000186886
WARNING: missing markdown for identifier ENSG00000196383
WARNING: missing markdown for identifier ENSG00000197364
WARNING: missing markdown for identifier ENSG00000197674
WARNING: missing markdown for identifier ENSG00000198452
WARNING: missing markdown for identifier ENSG00000198695
WARNING: missing markdown for identifier ENSG00000198712
WARNING: missing markdown for identifier ENSG00000198727
WARNING: missing markdown for identifier ENSG00000198763
WARNING: missing markdown for identifier ENSG00000198786
WARNING: missing markdown for identifier ENSG00000198804
WARNING: missing markdown for identifier ENSG00000198840
WARNING: missing markdown for identifier ENSG00000198886
WARNING: missing markdown for identifier ENSG00000198888
WARNING: missing markdown for identifier ENSG00000198899
WARNING: missing markdown for identifier ENSG00000198938
WARNING: missing markdown for identifier ENSG00000206401
WARNING: missing markdown for identifier ENSG00000206526
WARNING: missing markdown for identifier ENSG00000206549
WARNING: missing markdown for identifier ENSG00000211643
WARNING: missing markdown for identifier ENSG00000211673
WARNING: missing markdown for identifier ENSG00000211674
WARNING: missing markdown for identifier ENSG00000211676
WARNING: missing markdown for identifier ENSG00000211678
WARNING: missing markdown for identifier ENSG00000211681
WARNING: missing markdown for identifier ENSG00000211682
WARNING: missing markdown for identifier ENSG00000211693
WARNING: missing markdown for identifier ENSG00000211694
WARNING: missing markdown for identifier ENSG00000211829
WARNING: missing markdown for identifier ENSG00000212907
WARNING: missing markdown for identifier ENSG00000213297
WARNING: missing markdown for identifier ENSG00000224916
WARNING: missing markdown for identifier ENSG00000228253
WARNING: missing markdown for identifier ENSG00000228336
WARNING: missing markdown for identifier ENSG00000231004
WARNING: missing markdown for identifier ENSG00000231292
WARNING: missing markdown for identifier ENSG00000232593
WARNING: missing markdown for identifier ENSG00000233232
WARNING: missing markdown for identifier ENSG00000233999
WARNING: missing markdown for identifier ENSG00000236737
WARNING: missing markdown for identifier ENSG00000237988
WARNING: missing markdown for identifier ENSG00000244255
WARNING: missing markdown for identifier ENSG00000244682
WARNING: missing markdown for identifier ENSG00000250264
WARNING: missing markdown for identifier ENSG00000250374
WARNING: missing markdown for identifier ENSG00000250913
WARNING: missing markdown for identifier ENSG00000253649
WARNING: missing markdown for identifier ENSG00000254405
WARNING: missing markdown for identifier ENSG00000254658
WARNING: missing markdown for identifier ENSG00000255073
WARNING: missing markdown for identifier ENSG00000255274
WARNING: missing markdown for identifier ENSG00000255425
WARNING: missing markdown for identifier ENSG00000255819
WARNING: missing markdown for identifier ENSG00000258806
WARNING: missing markdown for identifier ENSG00000259261
WARNING: missing markdown for identifier ENSG00000261873
WARNING: missing markdown for identifier ENSG00000262152
WARNING: missing markdown for identifier ENSG00000262302
WARNING: missing markdown for identifier ENSG00000262481
WARNING: missing markdown for identifier ENSG00000262660
WARNING: missing markdown for identifier ENSG00000265818
WARNING: missing markdown for identifier ENSG00000266826
WARNING: missing markdown for identifier ENSG00000268975
WARNING: missing markdown for identifier ENSG00000270505
WARNING: missing markdown for identifier ENSG00000271178
WARNING: missing markdown for identifier ENSG00000273517
WARNING: missing markdown for identifier ENSG00000273578
WARNING: missing markdown for identifier ENSG00000274243
WARNING: missing markdown for identifier ENSG00000274283
WARNING: missing markdown for identifier ENSG00000274438
WARNING: missing markdown for identifier ENSG00000274610
WARNING: missing markdown for identifier ENSG00000274707
WARNING: missing markdown for identifier ENSG00000274847
WARNING: missing markdown for identifier ENSG00000275148
WARNING: missing markdown for identifier ENSG00000275407
WARNING: missing markdown for identifier ENSG00000275688
WARNING: missing markdown for identifier ENSG00000275798
WARNING: missing markdown for identifier ENSG00000275918
WARNING: missing markdown for identifier ENSG00000276468
WARNING: missing markdown for identifier ENSG00000277163
WARNING: missing markdown for identifier ENSG00000277263
WARNING: missing markdown for identifier ENSG00000277957
WARNING: missing markdown for identifier ENSG00000278481
WARNING: missing markdown for identifier ENSG00000278992
WARNING: missing markdown for identifier ENSG00000279610
WARNING: missing markdown for identifier ENSG00000279846
WARNING: missing markdown for identifier ENSG00000280038
WARNING: missing markdown for identifier ENSG00000281395
WARNING: missing markdown for identifier ENSG00000281406
WARNING: missing markdown for identifier ENSG00000281963
WARNING: missing markdown for identifier ENSG00000282232
WARNING: missing markdown for identifier ENSG00000282253
WARNING: missing markdown for identifier ENSG00000282506
WARNING: missing markdown for identifier ENSG00000282543
WARNING: missing markdown for identifier ENSG00000282651
WARNING: missing markdown for identifier ENSG00000282719
WARNING: missing markdown for identifier ENSG00000283227
WARNING: missing markdown for identifier ENSG00000283243
WARNING: missing markdown for identifier ENSG00000283268
WARNING: missing markdown for identifier ENSG00000283428
WARNING: missing markdown for identifier ENSG00000283586
WARNING: missing markdown for identifier ENSG00000283758
WARNING: missing markdown for identifier ENSG00000283787
WARNING: missing markdown for identifier ENSG00000284622
WARNING: missing markdown for identifier ENSG00000284629
WARNING: missing markdown for identifier ENSG00000284631
WARNING: missing markdown for identifier ENSG00000284635
WARNING: missing markdown for identifier ENSG00000284643
WARNING: missing markdown for identifier ENSG00000284667
WARNING: missing markdown for identifier ENSG00000284704
WARNING: missing markdown for identifier ENSG00000284718
WARNING: missing markdown for identifier ENSG00000284725
WARNING: missing markdown for identifier ENSG00000284873
WARNING: missing markdown for identifier ENSG00000285010
WARNING: missing markdown for identifier ENSG00000285130
WARNING: missing markdown for identifier ENSG00000285508
WARNING: missing markdown for identifier ENSG00000285607
WARNING: missing markdown for identifier ENSG00000285620
WARNING: missing markdown for identifier ENSG00000285657
WARNING: missing markdown for identifier ENSG00000285687
WARNING: missing markdown for identifier ENSG00000285723
WARNING: missing markdown for identifier ENSG00000285765
WARNING: missing markdown for identifier ENSG00000285814
WARNING: missing markdown for identifier ENSG00000285832
WARNING: missing markdown for identifier ENSG00000285913
WARNING: missing markdown for identifier ENSG00000285937
WARNING: missing markdown for identifier ENSG00000285950
WARNING: missing markdown for identifier ENSG00000288373
WARNING: missing markdown for identifier ENSG00000288701
WARNING: missing markdown for identifier ENSG00000288702
WARNING: missing markdown for identifier ENSG00000288705
WARNING: missing markdown for identifier ENSG00000288708
WARNING: missing markdown for identifier ENSG00000288709
WARNING: missing markdown for identifier ENSG00000288722
WARNING: missing markdown for identifier ENSG00000288784
WARNING: missing markdown for identifier ENSG00000289604

@raynamharris raynamharris changed the title missing gene identifies missing gene identifiers Sep 2, 2022
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