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fix: Preserve n/a during FD sum
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fmriprep/interfaces/confounds.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -170,7 +170,7 @@ def _run_interface(self, runtime):
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diff = motion[['trans_x', 'trans_y', 'trans_z', 'rot_x', 'rot_y', 'rot_z']].diff()
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diff[['rot_x', 'rot_y', 'rot_z']] *= self.inputs.radius
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173-
fd = pd.DataFrame(diff.abs().sum(axis=1), columns=['FramewiseDisplacement'])
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fd = pd.DataFrame(diff.abs().sum(axis=1, skipna=False), columns=['FramewiseDisplacement'])
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fd.to_csv(self._results['out_file'], sep='\t', index=False)
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