fix: Preserve n/a during FD sum

nipreps · Feb 7, 2025 · 8c02a8d · 8c02a8d
1 parent 22163d3
commit 8c02a8d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/fmriprep/interfaces/confounds.py b/fmriprep/interfaces/confounds.py
@@ -170,7 +170,7 @@ def _run_interface(self, runtime):
         diff = motion[['trans_x', 'trans_y', 'trans_z', 'rot_x', 'rot_y', 'rot_z']].diff()
         diff[['rot_x', 'rot_y', 'rot_z']] *= self.inputs.radius
 
-        fd = pd.DataFrame(diff.abs().sum(axis=1), columns=['FramewiseDisplacement'])
+        fd = pd.DataFrame(diff.abs().sum(axis=1, skipna=False), columns=['FramewiseDisplacement'])
 
         fd.to_csv(self._results['out_file'], sep='\t', index=False)