diff --git a/fmriprep/interfaces/confounds.py b/fmriprep/interfaces/confounds.py index 8d069b717..ec4cf8933 100644 --- a/fmriprep/interfaces/confounds.py +++ b/fmriprep/interfaces/confounds.py @@ -170,7 +170,7 @@ def _run_interface(self, runtime): diff = motion[['trans_x', 'trans_y', 'trans_z', 'rot_x', 'rot_y', 'rot_z']].diff() diff[['rot_x', 'rot_y', 'rot_z']] *= self.inputs.radius - fd = pd.DataFrame(diff.abs().sum(axis=1), columns=['FramewiseDisplacement']) + fd = pd.DataFrame(diff.abs().sum(axis=1, skipna=False), columns=['FramewiseDisplacement']) fd.to_csv(self._results['out_file'], sep='\t', index=False)