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| 1 | +1.0.1 (February 26, 2018) |
| 2 | +========================= |
| 3 | + |
| 4 | +###### [Full changelog](https://github.com/nipy/nipype/milestone/16?closed=1) |
| 5 | + |
| 6 | +* FIX: Small bug in freesurfer label2annot fill_thresh specs [#2377](https://github.com/nipy/nipype/pull/2377) |
| 7 | +* FIX: Error creating gradients in DTIRecon [#2460](https://github.com/nipy/nipype/pull/2460) |
| 8 | +* FIX: improve matlab_cmd [#2452](https://github.com/nipy/nipype/pull/2452) |
| 9 | +* FIX: Extract unit information from image header in CompCor [#2458](https://github.com/nipy/nipype/pull/2458) |
| 10 | +* FIX: Update pybids data directory, unbundle out-of-date numpydoc [#2437](https://github.com/nipy/nipype/pull/2437) |
| 11 | +* FIX: Out_file bugs in Afni.Zcat and Afni.Merge interfaces [#2424](https://github.com/nipy/nipype/pull/2424) |
| 12 | +* FIX: Re-enable spm.Realign to take lists of lists of files [#2409](https://github.com/nipy/nipype/pull/2409) |
| 13 | +* FIX: Remove deprecated output from ICC interface [#2422](https://github.com/nipy/nipype/pull/2422) |
| 14 | +* FIX: Argstr for mask in Afni.BlurToFWHM [#2418](https://github.com/nipy/nipype/pull/2418) |
| 15 | +* FIX: Default value for sbatch_args (SLURMGraph) [#2417](https://github.com/nipy/nipype/pull/2417) |
| 16 | +* FIX: Ortvec argstr for Afni.Deconvolve [#2415](https://github.com/nipy/nipype/pull/2415) |
| 17 | +* FIX: Bug fixes for afni.model [#2398](https://github.com/nipy/nipype/pull/2398) |
| 18 | +* DOC: Add brief neurodocker tutorial [#2464](https://github.com/nipy/nipype/pull/2464) |
| 19 | +* DOC: Fix tutorials [#2459](https://github.com/nipy/nipype/pull/2459) |
| 20 | +* ENH: antsRegistrationSyNQuick interface [#2453](https://github.com/nipy/nipype/pull/2453) |
| 21 | +* ENH: Automate updates of CHANGES [#2440](https://github.com/nipy/nipype/pull/2440) |
| 22 | +* ENH: Add SPM Fieldmap Tool wrapper [#1905](https://github.com/nipy/nipype/pull/1905) |
| 23 | +* ENH: Additional option for DataGrabber [#1915](https://github.com/nipy/nipype/pull/1915) |
| 24 | +* ENH: Add 3dTproject AFNI interface, Fix OneDToolPy, Add -noFDR flag to 3dDeconvolve [#2426](https://github.com/nipy/nipype/pull/2426) |
| 25 | +* ENH: c3d/c4d interface [#2430](https://github.com/nipy/nipype/pull/2430) |
| 26 | +* ENH: Allow input weight for AFNI's volreg. [#2396](https://github.com/nipy/nipype/pull/2396) |
| 27 | +* ENH: Delay crashing if exception is raised in local hash check [#2410](https://github.com/nipy/nipype/pull/2410) |
| 28 | +* CI: Add doctests to pytest script [#2449](https://github.com/nipy/nipype/pull/2449) |
| 29 | +* CI: Ignore tests in calculating coverage [#2443](https://github.com/nipy/nipype/pull/2443) |
| 30 | +* CI: Saturate Circle workflow [#2386](https://github.com/nipy/nipype/pull/2386) |
| 31 | +* REF: Update and factor mount table parsing [#2444](https://github.com/nipy/nipype/pull/2444) |
| 32 | +* REF: Make ignore_exception a class attribute [#2414](https://github.com/nipy/nipype/pull/2414) |
| 33 | + |
| 34 | +1.0.0 (January 24, 2018) |
| 35 | +======================== |
| 36 | + |
| 37 | +###### [Full changelog](https://github.com/nipy/nipype/milestone/16?closed=1) |
| 38 | + |
| 39 | +* FIX: Change to interface workdir within ``Interface.run()`` instead Node (https://github.com/nipy/nipype/pull/2384) |
| 40 | +* FIX: PBS plugin submissions (https://github.com/nipy/nipype/pull/2344) |
| 41 | +* FIX: Graph plugins submissions (https://github.com/nipy/nipype/pull/2359) |
| 42 | +* FIX: Logging error if % in interface command (https://github.com/nipy/nipype/pull/2364) |
| 43 | +* FIX: Robustly handled outputs of 3dFWHMx across different versions of AFNI (https://github.com/nipy/nipype/pull/2373) |
| 44 | +* FIX: Cluster threshold in randomise + change default prefix (https://github.com/nipy/nipype/pull/2369) |
| 45 | +* FIX: Errors parsing ``$DISPLAY`` (https://github.com/nipy/nipype/pull/2363) |
| 46 | +* FIX: MultiProc starting workers at dubious wd (https://github.com/nipy/nipype/pull/2368) |
| 47 | +* FIX: Explicitly collect MultiProc job IDs (https://github.com/nipy/nipype/pull/2378) |
| 48 | +* FIX: Correct Windows environment canonicalization (https://github.com/nipy/nipype/pull/2328) |
| 49 | +* FIX: Linked libraries (https://github.com/nipy/nipype/pull/2322) |
| 50 | +* REF+FIX: Move BIDSDataGrabber to `interfaces.io` + fix correct default behavior (https://github.com/nipy/nipype/pull/2336) |
| 51 | +* REF+MAINT: Simplify hashing (https://github.com/nipy/nipype/pull/2383) |
| 52 | +* MAINT: Cleanup Interfaces base (https://github.com/nipy/nipype/pull/2387) |
| 53 | +* MAINT: Cleanup EngineBase (https://github.com/nipy/nipype/pull/2376) |
| 54 | +* MAINT: Cleaning / simplify ``Node`` (https://github.com/nipy/nipype/pull/2325) |
| 55 | +* MAINT+ENH: Update and extend MRtrix3 interfaces (https://github.com/nipy/nipype/pull/2338) |
| 56 | +* ENH: Add AFNI interface for 3dConvertDset (https://github.com/nipy/nipype/pull/2337) |
| 57 | +* ENH: Allow specific interface command prefixes (https://github.com/nipy/nipype/pull/2379) |
| 58 | +* STY: Cleanup of PEP8 violations (https://github.com/nipy/nipype/pull/2358) |
| 59 | +* STY: Cleanup of trailing spaces and adding of missing newlines at end of files (https://github.com/nipy/nipype/pull/2355) |
| 60 | +* STY: Apply yapf to codebase (https://github.com/nipy/nipype/pull/2371) |
| 61 | +* DOC: Updated guide for contributing (https://github.com/nipy/nipype/pull/2393) |
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