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[ENH] Add GenericLabel to antsRegistration interface as MultiLabel is outdated. #3423

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axiezai opened this issue Dec 15, 2021 · 0 comments · Fixed by #3424
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[ENH] Add GenericLabel to antsRegistration interface as MultiLabel is outdated. #3423

axiezai opened this issue Dec 15, 2021 · 0 comments · Fixed by #3424

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@axiezai
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axiezai commented Dec 15, 2021

From antsRegistration manual page:

 -n, --interpolation Linear
                         NearestNeighbor
                         MultiLabel[<sigma=imageSpacing>,<alpha=4.0>]
                         Gaussian[<sigma=imageSpacing>,<alpha=1.0>]
                         BSpline[<order=3>]
                         CosineWindowedSinc
                         WelchWindowedSinc
                         HammingWindowedSinc
                         LanczosWindowedSinc
                         GenericLabel[<interpolator=Linear>]

The GenericLabel option is currently missing from the input spec:

nipype/nipype/interfaces/ants/registration.py

Lines 411 to 423 in 5ac2f18

interpolation = traits.Enum(
"Linear",
"NearestNeighbor",
"CosineWindowedSinc",
"WelchWindowedSinc",
"HammingWindowedSinc",
"LanczosWindowedSinc",
"BSpline",
"MultiLabel",
"Gaussian",
argstr="%s",
usedefault=True,
)

Additionally, MultiLabel is no longer recommended and GenericLabel is the preferred option.

Will make a PR.
@axiezai axiezai changed the title Add genericLabel to ANTSRegistration interface as MultiLabel is outdated. Add genericLabel to antsRegistration interface as MultiLabel is outdated. Dec 15, 2021
@axiezai axiezai changed the title Add genericLabel to antsRegistration interface as MultiLabel is outdated. Add enericLabel to antsRegistration interface as MultiLabel is outdated. Dec 15, 2021
@axiezai axiezai changed the title Add enericLabel to antsRegistration interface as MultiLabel is outdated. Add GenericLabel to antsRegistration interface as MultiLabel is outdated. Dec 15, 2021
@axiezai axiezai changed the title Add GenericLabel to antsRegistration interface as MultiLabel is outdated. [ENH] Add GenericLabel to antsRegistration interface as MultiLabel is outdated. Dec 15, 2021
@axiezai axiezai mentioned this issue Dec 15, 2021
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@tsalo tsalo mentioned this issue Dec 5, 2023
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ENH: Add "GenericLabel" to antsRegistration interpolation option. axiezai/nipype
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@axiezai