fix(exec): npx to run specified version if multiple version exist globally (#7587)

When multiple version of the same package is exist globally either at
top level or at any level as a sub dependency, even though the version
specified does not exist at top level it was running top level bin since
it matches the bin name.
This fixes checks for depth of the found node along with already
existing specs checks.

Fixes: #7486

Author: milaninfy

Diff for: workspaces/libnpmexec/lib/index.js

@@ -32,7 +32,7 @@ const getManifest = async (spec, flatOptions) => {
 
 // Returns the required manifest if the spec is missing from the tree
 // Returns the found node if it is in the tree
-const missingFromTree = async ({ spec, tree, flatOptions, isNpxTree }) => {
+const missingFromTree = async ({ spec, tree, flatOptions, isNpxTree, shallow }) => {
   // If asking for a spec by name only (spec.raw === spec.name):
   //  - In local or global mode go with anything in the tree that matches
   //  - If looking in the npx cache check if a newer version is available
@@ -41,6 +41,10 @@ const missingFromTree = async ({ spec, tree, flatOptions, isNpxTree }) => {
     // registry spec that is not a specific tag.
     const nodesBySpec = tree.inventory.query('packageName', spec.name)
     for (const node of nodesBySpec) {
+      // continue if node is not a top level node
+      if (shallow && node.depth) {
+        continue
+      }
       if (spec.rawSpec === '*') {
         return { node }
       }
@@ -202,7 +206,7 @@ const exec = async (opts) => {
       const globalArb = new Arborist({ ...flatOptions, path: globalPath, global: true })
       const globalTree = await globalArb.loadActual()
       const { manifest: globalManifest } =
-        await missingFromTree({ spec, tree: globalTree, flatOptions })
+        await missingFromTree({ spec, tree: globalTree, flatOptions, shallow: true })
       if (!globalManifest && await fileExists(`${globalBin}/${args[0]}`)) {
         binPaths.push(globalBin)
         return await run()

Diff for: workspaces/libnpmexec/test/registry.js

@@ -164,3 +164,65 @@ t.test('run multiple from registry', async t => {
     value: 'packages-2.0.0',
   })
 })
+t.test('packages with different versions in the global tree', async t => {
+  const pkgA1 = createPkg({
+    localVersion: '1.0.0',
+    versions: ['1.0.0', '2.0.0'],
+    name: '@npmcli/A',
+  })
+
+  const pkgA2 = createPkg({
+    localVersion: '2.0.0',
+    name: '@npmcli/A',
+    versions: ['1.0.0', '2.0.0'],
+  })
+
+  const pkgB = createPkg({
+    localVersion: '1.0.0',
+    name: '@npmcli/B',
+  })
+
+  const pkgBfix = merge(pkgB.fixtures, {
+    node_modules: {
+      '@npmcli': { B: {
+        node_modules: {
+          '@npmcli': {
+            A: pkgA2.fixtures.packages['@npmcli-A-2.0.0'],
+          } },
+        'package.json': { dependencies: { '@npmcli/A': '2.0.0' } },
+      },
+      },
+    } })
+
+  const { chmod, exec, readOutput, binLinks, registry, path } = setup(t, {
+    pkg: [pkgA2.pkg, pkgA1.pkg, pkgB.pkg],
+    global: true,
+    testdir: merge(pkgA1.fixtures, pkgBfix),
+  })
+
+  await chmod()
+  await binLinks()
+
+  await pkgA2.package({ registry, path, times: 2, tarballs: ['2.0.0'] })
+  await pkgA1.package({ registry, path, times: 1, tarballs: [] })
+
+  await exec({
+    args: ['@npmcli/[email protected]'],
+  })
+
+  t.match(await readOutput('@npmcli-A'), {
+    value: 'packages-2.0.0',
+    args: [],
+    created: 'packages/@npmcli-A-2.0.0/bin-file.js',
+  })
+
+  await exec({
+    args: ['@npmcli/[email protected]'],
+  })
+
+  t.match(await readOutput('@npmcli-A'), {
+    value: 'local-1.0.0',
+    args: [],
+    created: 'global/node_modules/@npmcli/A/bin-file.js',
+  })
+})