[ML-413] upgrade oneapi for CI and fix Token-Permissions error

.github/workflows/ci-checks-build.yml

@@ -8,7 +8,7 @@ permissions:  # added using https://github.com/step-security/secure-repo
 jobs:
   code-checks-scala:
     name: Code Checks for Scala
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -22,7 +22,7 @@ jobs:
 
   code-checks-java:
     name: Code Checks for Java
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -36,21 +36,21 @@ jobs:
 
   code-checks-cpp:
     name: Code Checks for C++
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Install clang-format
         run: |
           sudo apt-get update
-          sudo apt-get install -y clang-format-10
+          sudo apt-get install -y clang-format
       - name: Check C++ code
         run: |
           cd ${{github.workspace}}/mllib-dal/src/main/native
           ${{github.workspace}}/dev/code-checks/lint-cpp.sh
 
   code-build:
     name: Build Checks
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -65,7 +65,7 @@ jobs:
             ~/.m2/repository
             /opt/intel/oneapi
             ~/opt
-          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2023.0.0
+          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2025.2
           restore-keys: |
             ${{ runner.os }}-
       - name: Build Test for CPU and GPU

.github/workflows/ci-tests.yml

@@ -8,7 +8,7 @@ permissions:  # added using https://github.com/step-security/secure-repo
 jobs:
   local-test-oneAPI_table:
     name: Local Test for Units (OneAPI Table)
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -23,15 +23,15 @@ jobs:
             ~/.m2/repository
             /opt/intel/oneapi
             ~/opt
-          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2023.0.0
+          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2025.2
           restore-keys: |
             ${{ runner.os }}-
       - name: Local Test
         run: |
           ${{github.workspace}}/dev/ci/ci-local-dpc-test.sh
   local-test-CPU:
     name: Local Test for Units (CPU)
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -46,7 +46,7 @@ jobs:
             ~/.m2/repository
             /opt/intel/oneapi
             ~/opt
-          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2023.0.0
+          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2025.2
           restore-keys: |
             ${{ runner.os }}-
       - name: Local Test
@@ -55,7 +55,7 @@ jobs:
   yarn-test:
     if: ${{ false }}  # disable for now
     name: Yarn Test for Examples (CPU)
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -70,15 +70,15 @@ jobs:
             ~/.m2/repository
             /opt/intel/oneapi
             ~/opt
-          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2023.0.0
+          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2025.2
           restore-keys: |
             ${{ runner.os }}-
       - name: Cluster Test
         run: |
           ${{github.workspace}}/dev/ci/ci-yarn-test-cpu.sh
   standalone-scala-test:
     name: Standalone CPU_GPU_PROFILE Test for scala Examples (CPU)
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -93,15 +93,15 @@ jobs:
             ~/.m2/repository
             /opt/intel/oneapi
             ~/opt
-          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2023.0.0
+          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2025.2
           restore-keys: |
             ${{ runner.os }}-
       - name: Cluster Test
         run: |
           ${{github.workspace}}/dev/ci/ci-standalone-scala-test-cpu.sh
   standalone-python-test:
     name: Standalone CPU_GPU_PROFILE Test for python Examples (CPU)
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@f43a0e5ff2bd294095638e18286ca9a3d1956744 # v3.6.0
       - name: Set up JDK 1.8
@@ -116,7 +116,7 @@ jobs:
             ~/.m2/repository
             /opt/intel/oneapi
             ~/opt
-          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2023.0.0
+          key: ${{ runner.os }}_spark-3.3.3_hadoop-3.2.0_oneapi-2025.2
           restore-keys: |
             ${{ runner.os }}-
       - name: Cluster Test

.github/workflows/dev_cron.yml

@@ -27,15 +27,15 @@ on:
 
 permissions:
   issues: write
-  contents: write
+  pull-requests: write
+  contents: read
 
 jobs:
   process:
     name: Process
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@ee0669bd1cc54295c223e0bb666b733df41de1c5 # v2.7.0
-
       - name: Comment Issues link
         if: |
           github.event_name == 'pull_request_target' &&

dev/code-checks/lint-cpp.sh

@@ -14,7 +14,7 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
-CLANG_FORMAT=$(which clang-format-10)
+CLANG_FORMAT=$(which clang-format)
 CLANG_FORMAT_VERSION=$($CLANG_FORMAT --version)
 
 if [ -z $CLANG_FORMAT ]; then

dev/install-build-deps-centos.sh

@@ -13,11 +13,11 @@ repo_gpgcheck=1
 gpgkey=https://yum.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
 EOF
   sudo mv /tmp/oneAPI.repo /etc/yum.repos.d
-  sudo yum install -y intel-oneapi-ccl-devel-2021.8.0 \
-                      intel-oneapi-tbb-common-devel-2021.8.0 intel-oneapi-tbb-devel-2021.8.0 \
-                      intel-oneapi-mpi-devel-2021.8.0 \
-                      intel-oneapi-dal-common-devel-2023.0.0 intel-oneapi-dal-devel-2023.0.0 \
-                      intel-oneapi-compiler-dpcpp-cpp-2023.0.0 intel-oneapi-compiler-dpcpp-cpp-common-2023.0.0 intel-oneapi-compiler-dpcpp-cpp-runtime-2023.0.0 intel-oneapi-dpcpp-cpp-2023.0.0
+  sudo yum install -y intel-oneapi-ccl-devel-2021.16 \
+                      intel-oneapi-tbb-common-devel-2021.13 intel-oneapi-tbb-devel-2022.2 \
+                      intel-oneapi-mpi-devel-2021.16 \
+                      intel-oneapi-dal-common-devel-2025.6 intel-oneapi-dal-devel-2025.6 \
+                      intel-oneapi-compiler-dpcpp-cpp-2025.3 intel-oneapi-compiler-dpcpp-cpp-common-2025.3 intel-oneapi-compiler-dpcpp-cpp-runtime-2025.3 intel-oneapi-dpcpp-cpp-2025.3
 else
   echo "oneAPI components already installed!"
 fi  

dev/install-build-deps-ubuntu.sh

@@ -4,15 +4,14 @@ if [ ! -d /opt/intel/oneapi ]; then
   echo "Installing oneAPI components ..."
   sudo apt clean
   cd /tmp
-  wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB \
-  | gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
+  wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
   echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
   sudo apt update
-  sudo apt-get install -y intel-oneapi-ccl-devel-2021.8.0 \
-                          intel-oneapi-tbb-common-devel-2021.8.0 intel-oneapi-tbb-devel-2021.8.0 \
-                          intel-oneapi-mpi-devel-2021.8.0 \
-                          intel-oneapi-dal-common-devel-2023.0.0 intel-oneapi-dal-devel-2023.0.0 \
-                          intel-oneapi-compiler-dpcpp-cpp-2023.0.0 intel-oneapi-compiler-dpcpp-cpp-common-2023.0.0 intel-oneapi-compiler-dpcpp-cpp-runtime-2023.0.0 intel-oneapi-dpcpp-cpp-2023.0.0
+  sudo apt-get install -y intel-oneapi-ccl-devel-2021.16 \
+                          intel-oneapi-tbb-common-devel-2021.13 intel-oneapi-tbb-devel-2022.2 \
+                          intel-oneapi-mpi-devel-2021.16 \
+                          intel-oneapi-dal-common-devel-2025.6 intel-oneapi-dal-devel-2025.6 \
+                          intel-oneapi-compiler-dpcpp-cpp-2025.3 intel-oneapi-compiler-dpcpp-cpp-common-2025.3 intel-oneapi-compiler-dpcpp-cpp-runtime-2025.3 intel-oneapi-dpcpp-cpp-2025.3
 else
   echo "oneAPI components already installed!"
 fi

dev/install-runtime-deps-centos.sh

@@ -13,9 +13,9 @@ repo_gpgcheck=1
 gpgkey=https://yum.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
 EOF
   sudo mv /tmp/oneAPI.repo /etc/yum.repos.d
-  sudo yum install -y intel-oneapi-ccl-2021.8.0 \
-                      intel-oneapi-mpi-2021.8.0 \
-                      intel-oneapi-compiler-dpcpp-cpp-runtime-2023.0.0 intel-oneapi-dpcpp-cpp-2023.0.0
+  sudo yum install -y intel-oneapi-ccl-2021.16 \
+                      intel-oneapi-mpi-2021.16 \
+                      intel-oneapi-compiler-dpcpp-cpp-runtime-2025.3 intel-oneapi-dpcpp-cpp-2025.3
 else
   echo "oneAPI components already installed!"
 fi  

dev/install-runtime-deps-ubuntu.sh

@@ -4,13 +4,12 @@ if [ ! -d /opt/intel/oneapi ]; then
   echo "Installing oneAPI components ..."
   sudo apt clean
   cd /tmp
-  wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB \
-  | gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
+  wget -O- https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB | gpg --dearmor | sudo tee /usr/share/keyrings/oneapi-archive-keyring.gpg > /dev/null
   echo "deb [signed-by=/usr/share/keyrings/oneapi-archive-keyring.gpg] https://apt.repos.intel.com/oneapi all main" | sudo tee /etc/apt/sources.list.d/oneAPI.list
   sudo apt update
-  sudo apt-get install -y intel-oneapi-ccl-2021.8.0 \
-                          intel-oneapi-mpi-2021.8.0 \
-                          intel-oneapi-compiler-dpcpp-cpp-runtime-2023.0.0 intel-oneapi-dpcpp-cpp-2023.0.0
+  sudo apt-get install -y intel-oneapi-ccl-2021.16 \
+                          intel-oneapi-mpi-2021.16 \
+                          intel-oneapi-compiler-dpcpp-cpp-runtime-2025.3 intel-oneapi-dpcpp-cpp-2025.3
 else
   echo "oneAPI components already installed!"
 fi

mllib-dal/pom.xml

@@ -192,7 +192,7 @@
     <dependency>
       <groupId>com.fasterxml.jackson.core</groupId>
       <artifactId>jackson-databind</artifactId>
-      <version>2.12.3</version>
+      <version>2.13.4</version>
     </dependency>
     <dependency>
       <groupId>org.apache.commons</groupId>

mllib-dal/src/main/native/service.cpp

@@ -212,9 +212,8 @@ NumericTablePtr homegenToSyclHomogen(NumericTablePtr ntHomogen) {
 
     // printNumericTable(ntHomogen, "ntHomogen:", 10, 10);
 
-    NumericTablePtr ntSycl =
-        HomogenNumericTable<CpuAlgorithmFPType>::create(
-            nColumns, nRows, NumericTable::doAllocate);
+    NumericTablePtr ntSycl = HomogenNumericTable<CpuAlgorithmFPType>::create(
+        nColumns, nRows, NumericTable::doAllocate);
 
     // printNumericTable(ntSycl, "ntSycl:", 10, 10);