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Dataset from InCell 2200 microscope misread as a plate #4271

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Rdornier opened this issue Jan 30, 2025 · 1 comment
Open

Dataset from InCell 2200 microscope misread as a plate #4271

Rdornier opened this issue Jan 30, 2025 · 1 comment
Milestone
8.1.1

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@Rdornier
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Bug description

Quick summary : Some datasets acquired by an InCell 2200 microscope are not correctly read as a plate by BioFormats. This seems to be due to a channel duplication. This duplication introduces a wix 0 suffix in the name of each image.

More info in the dedicated forum post

Dataset to test

Zenodo repo

Bioformats version

8.0.1
@imagesc-bot
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This issue has been mentioned on Image.sc Forum. There might be relevant details there:

https://forum.image.sc/t/incell-plates-with-duplicate-channels-not-recognized-as-plate-on-omero/107800/4

@melissalinkert melissalinkert added this to the 8.1.1 milestone Jan 30, 2025
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@melissalinkert @imagesc-bot @Rdornier