problem with netChop #120
Description
Hi, guys, I deployed netchop locally, but it seems don't work. Have you bumped into the similar problems before?
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paste: 2134/32138/hmm.inp: No such file or directory
sh: line 1: /hmm.inp: No such file or directory
sh: line 2: 2134/32138/hmm.inp: No such file or directory
sh: line 3: /sparse.inp: No such file or directory
paste: 2134/32138/hmm.inp: No such file or directory
sh: line 1: /hmm.inp: No such file or directory
sh: line 2: 2134/32138/hmm.inp: No such file or directory
sh: line 3: /bl.inp: No such file or directory
Unable to open(r) file 2134/32138/hmm.inp
sh: line 1: /bl.inp: No such file or directory
sh: line 1: 2134/32138/hmm.inp: No such file or directory
sh: line 2: /bl.res: No such file or directory
Unable to open(r) file 2134/32138/hmm.inp
sh: line 1: /sparse.inp: No such file or directory
sh: line 1: 2134/32138/hmm.inp: No such file or directory
sh: line 2: /sparse.res: No such file or directory
paste: 2134/32138/hmm.inp: No such file or directory
sh: line 1: /sparse.res: No such file or directory
sh: line 2: /bl.res: No such file or directory
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when I appoint a tmp dir specifically, it interrupts on the test fasta data shipped with the gz file.
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14 K . 0.226844 gi|3333147
15 A . 0.039277 gi|3333147
16 V . 0.087684 gi|3333147
17 R . 0.038433 gi|3333147
18 I . 0.071550 gi|3333147
Error. Wrong format for prediction line 18 I .
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