Repositories list

• agr_literature_ui

  Public
  This is a react app for displaying information for curation from Alliance resources (Demo)

  JavaScript

  •

  MIT License

  •0•0•0•1•Updated Feb 20, 2025Feb 20, 2025

• agr_ui

  Public
  JavaScript

  •9•14•1•0•Updated Feb 20, 2025Feb 20, 2025

• agr_java_software

  Public
  Java

  •

  MIT License

  •5•1•0•1•Updated Feb 20, 2025Feb 20, 2025

• agr_pavi

  Public
  AGR Proteins Annotations and Variants Inspector

  CSS

  •

  MIT License

  •0•0•0•4•Updated Feb 20, 2025Feb 20, 2025

• agr_literature_service

  Public
  Alliance Bibliographic Corpus (ABC) Manager

  Python

  •

  MIT License

  •1•1•0•0•Updated Feb 20, 2025Feb 20, 2025

• agr_curation

  Public
  CSS

  •

  MIT License

  •1•2•0•0•Updated Feb 19, 2025Feb 19, 2025

• agr_ansible_developers

  Public
  Jinja

  •3•0•0•1•Updated Feb 19, 2025Feb 19, 2025

• agr_document_classifier

  Public
  Python

  •

  MIT License

  •0•0•0•1•Updated Feb 18, 2025Feb 18, 2025

• agr_ferret

  Public
  Alliance of Genome Resources pre-ETL file fetching software.

  Python

  •

  MIT License

  •3•2•0•0•Updated Feb 14, 2025Feb 14, 2025

• agr_db_backups

  Public
  Python

  •0•0•0•0•Updated Feb 14, 2025Feb 14, 2025

• agr_chipmunk

  Public
  Java

  •

  MIT License

  •6•2•0•7•Updated Feb 13, 2025Feb 13, 2025

• agr_mati

  Public
  Minting and Tracking Identifiers (MaTI)

  Java

  •

  MIT License

  •0•2•0•0•Updated Feb 13, 2025Feb 13, 2025

• agr_intermine_builder

  Public
  Build intermine containers required for AllianceMine

  Shell

  •

  MIT License

  •3•0•0•1•Updated Feb 11, 2025Feb 11, 2025

• agr_ansible_devops

  Public
  Jinja

  •

  MIT License

  •0•2•0•0•Updated Feb 11, 2025Feb 11, 2025

• agr_base_linux_env

  Public
  Dockerfile

  •

  MIT License

  •3•0•0•0•Updated Feb 11, 2025Feb 11, 2025

• agr_preprocess

  Public
  Python

  •

  MIT License

  •3•0•0•0•Updated Feb 11, 2025Feb 11, 2025

• agr_file_generator

  Public
  This repo is for generating files from Alliance resources

  Python

  •

  MIT License

  •3•1•0•1•Updated Feb 11, 2025Feb 11, 2025

• agr_loader

  Public
  Data loader for the Alliance of Genome Resources website.

  Python

  •

  MIT License

  •5•1•0•1•Updated Feb 11, 2025Feb 11, 2025

• agr_amplify_jbrowse2

  Public
  Repo to build JBrowse 2 with AWS Amplify

  Perl

  •

  MIT License

  •0•1•0•0•Updated Feb 11, 2025Feb 11, 2025

• agr_textpresso

  Public
  C++

  •0•0•0•0•Updated Feb 11, 2025Feb 11, 2025

• agr_grobid_ebdeploy

  Public
  Makefile

  •0•0•0•0•Updated Feb 3, 2025Feb 3, 2025

• agr_jbrowse_gff

  Public
  Tools for processing Alliance GFF into JBrowse NCList

  Perl

  •

  MIT License

  •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• agr_jbrowse_vcf

  Public
  Tools for processing VCF data for JBrowse

  Shell

  •

  MIT License

  •0•0•0•0•Updated Jan 28, 2025Jan 28, 2025

• agr_genedescriptions

  Public
  Concise gene descriptions generator

  Python

  •

  MIT License

  •3•3•0•0•Updated Jan 28, 2025Jan 28, 2025

• agr_blast_service_configuration

  Public
  This repo is used to configure the Alliance Blast Service

  Python

  •

  MIT License

  •0•0•0•0•Updated Jan 23, 2025Jan 23, 2025

• agr_curation_schema

  Public
  Schema repository for the Alliance of Genome Resources persistent data store

  linkmlalliance-curationalliance-of-genome-resources

  Makefile

  •

  MIT License

  •1•7•0•1•Updated Jan 15, 2025Jan 15, 2025

• agr_schemas

  Public
  A repository of JSON schemas for incorporating data into the Alliance of Genome Resources.

  Python

  •

  MIT License

  •9•7•0•0•Updated Jan 14, 2025Jan 14, 2025

• agr_jbrowse_container

  Public
  Docker image of JBrowse Genome Browser

  Dockerfile

  •

  MIT License

  •17•0•0•0•Updated Jan 7, 2025Jan 7, 2025

• agr_alliancemine_ebdeploy

  Public
  Makefile

  •0•0•0•0•Updated Jan 7, 2025Jan 7, 2025

• agr_sentence_classifier

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 19, 2024Dec 19, 2024