Repositories list

• ss3sim

  Public
  An R package for stock-assessment simulation with Stock Synthesis

  fisheriesstock-synthesisr+ 2simulationr-package

  R

  •

  Other

  •28•39•43•3•Updated Oct 25, 2024Oct 25, 2024

• .github

  Public
  {ss3sim} is an R package that simplifies the steps needed to generate beautiful simulation output from the widely-used Stock Synthesis (SS3), a statistical age-structured stock assessment framework.

  0•0•0•0•Updated May 14, 2023May 14, 2023

• ss3models

  Public
  SS3 model setups for use with ss3sim

  HTML

  •

  Other

  •0•1•3•0•Updated Sep 8, 2021Sep 8, 2021

• ss3sim_andersonetal

  Public
  Anderson et al. (2014) - a description of the ss3sim R package

  PostScript

  •0•0•0•0•Updated Mar 31, 2021Mar 31, 2021

• ss3sim_nin

  Public
  Input sample size simulations

  0•1•0•0•Updated Oct 28, 2020Oct 28, 2020

• binning

  Public
  Code for paper investigating the optimal way to bin composition data in stock assessments.

  R

  •0•1•0•0•Updated Aug 6, 2019Aug 6, 2019

• compsampling

  Public
  Sampling of composition data in an age-structured stock assessment model

  0•0•0•0•Updated Jul 27, 2017Jul 27, 2017

• workshop

  Public
  A workshop demonstration of the package

  R

  •0•0•2•0•Updated Jul 5, 2017Jul 5, 2017

• natural-mortality

  Public
  Code for Johnson et al. (2015) -- stock assessment in the face of time-varying natural mortality.

  R

  •0•0•0•0•Updated Apr 23, 2017Apr 23, 2017

• procdata

  Public
  Code to investigate interaction of process error and data weighting

  R

  •0•0•0•0•Updated Dec 3, 2016Dec 3, 2016

• Empirical

  Public
  Files for creating hake OM in ss3sim and investigating empricial wt-at-age in assessment

  Scheme

  •0•0•4•0•Updated Jul 31, 2015Jul 31, 2015

• estgrowth

  Public
  Simulations with ss3sim to guide users when it is best to estimate growth within SS compared to using external estimates.

  R

  •0•0•2•0•Updated Apr 1, 2015Apr 1, 2015