PLIP v1.3.4b

• DNA/RNA can be selected as receptor with --dnareceptor
• Composite ligands and intra-protein mode: Annotation which part of the ligand interacts with the receptor
• Improved handling of NMR structures
• Filter for extremely large ligands
• Speed-up for file reading and parallel visualization
• More debugging messages

PLIP v1.3.3

• Adds XML Parser module for PLIP XML files
• Detection of intramolecular interactions with --intra
• improved error correction in PDB files

PLIP v1.3.2

• Processing of protein-peptide interactions via --peptides
• option to keep modified residues as ligands (--keepmod)
• Improved code for reports
• Smart ordering of ligand in composite compounds
• Fixes handling and visualization of DNA/RNA

PLIP v1.3.1a

Hotfix Release

PLIP v1.3.1

• Support for amino acids as ligands
• Plugin-ready for PyMOL and Chimera
• Refactores code and optimized input
• Improved verbose and debug log system
• Bugfixes for problems affecting some structures with aromatic rings

PLIP v1.3.0a

Bugfix Release

• Fixes problem with segmentation fault in at least one structure (PDB ID 1U6B)
• Typing of aromatic rings has been changed from using OpenBabel to manual (discriminating 5-membered and 6-membered rings)

PLIP v1.3.0

• Batch processing
• Improvements to verbose mode and textual output

PLIP v1.2.3

• Better support for files from MD and docking software
• Fixes issues with large and complex structures
• Speed optimizations

PLIP v1.2.2

• Option to consider alternate atom locations (e.g. for ligands with several conformations)
• Automatic fixing of missing ligand names
• Improved handling of broken PDB files and non-standard filenames
• Improved error handling

PLIP v1.2.1

• Mapping of canonical atom order to PDB atom order for each ligand
• Introduction of debug mode (--debug)
• More robust visualization
• Handling of negative residue numbers for more cases
• Composite members in alphabetical order
• Fixes errors in aromatic ring detection
• Code improvements