Skip to content

Commit d82045c

Browse files
committed
Merge branch '244-new-ard-table-35-add-gtsummary-and-ard' of https://github.com/pharmaverse/cardinal into 244-new-ard-table-35-add-gtsummary-and-ard
2 parents 9a0137a + 52b3776 commit d82045c

File tree

1 file changed

+3
-12
lines changed

1 file changed

+3
-12
lines changed

R/fda-table_35.R

+3-12
Original file line numberDiff line numberDiff line change
@@ -31,7 +31,6 @@ make_table_35 <- function(df,
3131
soc_var = "AEBODSYS",
3232
lbl_overall = NULL,
3333
na_level = "<Missing>") {
34-
3534
ard <- ard_table_35(
3635
df = df,
3736
denominator = denominator,
@@ -57,7 +56,6 @@ make_table_35 <- function(df,
5756
} else {
5857
return(tbl) # nocov
5958
}
60-
6159
}
6260

6361
#' Pre-Process Data for Table 35 Creation
@@ -69,7 +67,6 @@ preproc_df_table_35 <- function(df,
6967
saffl_var = "SAFFL",
7068
soc_var = "AEBODSYS",
7169
na_level = "<Missing>") {
72-
7370
assert_subset(c(soc_var, arm_var, id_var, saffl_var), names(df))
7471
assert_flag_variables(df, saffl_var)
7572

@@ -102,13 +99,11 @@ ard_table_35 <- function(df,
10299
soc_var = "AEBODSYS",
103100
lbl_overall = NULL,
104101
na_level = "<Missing>") {
105-
106102
df <- preproc_df_table_35(df, id_var, arm_var, saffl_var, soc_var, na_level)
107103

108104
if (is.null(denominator)) {
109105
denominator <- df # nocov
110-
}
111-
else {
106+
} else {
112107
denominator <-
113108
alt_counts_df_preproc(denominator, id_var, arm_var, saffl_var)
114109
}
@@ -172,13 +167,11 @@ make_table_35_gtsummary <- function(df,
172167
soc_var = "AEBODSYS",
173168
lbl_overall = NULL,
174169
na_level = "<Missing>") {
175-
176170
df <- preproc_df_table_35(df, id_var, arm_var, saffl_var, soc_var, na_level)
177171

178172
if (is.null(denominator)) {
179173
denominator <- df # nocov
180-
}
181-
else {
174+
} else {
182175
denominator <-
183176
alt_counts_df_preproc(denominator, id_var, arm_var, saffl_var)
184177
}
@@ -232,9 +225,7 @@ make_table_35_gtsummary <- function(df,
232225
x = gtsummary::theme_gtsummary_compact(),
233226
expr = tbl_gts
234227
)
235-
}
236-
237-
else {
228+
} else {
238229
tbl_gts <- tbl_gts
239230

240231
tbl <- gtsummary::with_gtsummary_theme(

0 commit comments

Comments
 (0)