Define needed metadata fields

[tcatapano]

@myrmoteras: Ive created this private repo for the prep of the Drosophilid data. The first step is to define the target metadata fields and what cleaning needs to be done. Take a look at https://raw.githubusercontent.com/plazi/drosophilid-data/master/BibData-Drosophila.corrected.tab.csv and let me know what you think needs to be done.

Right now the fields are:

ID-taxodros|author|year|title|pagination|volume|journalOrPublisher|formatAndMeta|pubDate|libNumber|issue|editor|volumeTitle

[myrmoteras]

@tcatapano Ideally we need to be able to provide the data that is required in CrossRef, DataCite, and now Wikicite to create depositions that can be used by these services. I assume that taxodros has all the fields, including the type of publications? Also, how is the names of the author provided? how in the case where there are multiple authors?

[myrmoteras]

this is an example of the elements that are provided by Taxodros, and those that need be added to create a valid deposition.

It seems at a first glance that only the author names have to be parsed into separate fields, e.g. Abd El-Halim, A.S. & Mostafa, A.A. & Allam, K.A.M.

EXAMPLE
ID-taxodros| abd el-halim et al., 2005|
author| Abd El-Halim, A.S. & Mostafa, A.A. & Allam, K.A.M.|
year| 2005|
title| Dipterous flies species and their densities in fourteen Egyptian governorates.|
pagination| 351-362|
volume| 35|
journalOrPublisher| J. Egypt. Soc. Parasitol.|
formatAndMeta| pdf|
pubDate| |
libNumber| |
issue| |
editor| |
|volumeTitle| |

reuquired to be added for the upload at Zenodo
uploadType | publication
PublicationType | Journal article
Description | uploaded by Plazi from Taxodros
AccessRight | open access
License | either CC BY or licence not specified
Communities | Biodiversity Literature Repository

[tcatapano]

@myrmoteras I missed the notification of your comments. I'll get to work on the conversion targetting the Zenodo upload first

[tcatapano]

see #2: authors have been split into own columns

[tcatapano]

for required zenodo fields see #3