Merge pull request #19 from CloudChaoszero/replace-pymc3-arviz-plots_part7

Replacing PyMC3 plots w/ Arviz plots & sigma Param change [Part 7]

Author: twiecki

Diff for: examples/samplers/DEMetropolisZ_EfficiencyComparison.ipynb

@@ -451,9 +451,7 @@
   {
    "cell_type": "code",
    "execution_count": 5,
-   "metadata": {
-    "scrolled": false
-   },
+   "metadata": {},
    "outputs": [
     {
      "data": {
@@ -530,9 +528,7 @@
   {
    "cell_type": "code",
    "execution_count": 6,
-   "metadata": {
-    "scrolled": false
-   },
+   "metadata": {},
    "outputs": [
     {
      "data": {
@@ -1373,7 +1369,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.10"
+   "version": "3.8.5"
   },
   "widgets": {
    "application/vnd.jupyter.widget-state+json": {

Diff for: examples/samplers/DEMetropolisZ_tune_drop_fraction.ipynb

@@ -127,9 +127,7 @@
   {
    "cell_type": "code",
    "execution_count": 5,
-   "metadata": {
-    "scrolled": false
-   },
+   "metadata": {},
    "outputs": [
     {
      "name": "stderr",
@@ -1387,13 +1385,6 @@
     "%load_ext watermark\n",
     "%watermark -n -u -v -iv -w"
    ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": []
   }
  ],
  "metadata": {
@@ -1412,7 +1403,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.10"
+   "version": "3.8.5"
   },
   "widgets": {
    "application/vnd.jupyter.widget-state+json": {

Diff for: examples/samplers/GLM-hierarchical-jax.ipynb

@@ -109,7 +109,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.9"
+   "version": "3.8.5"
   }
  },
  "nbformat": 4,

Diff for: examples/samplers/MLDA_gravity_surveying.ipynb

@@ -136,8 +136,8 @@
    ],
    "source": [
     "with pm.Model() as example:\n",
-    "    a = pm.Normal(\"a\", mu=0, sd=5)\n",
-    "    b = pm.HalfNormal(\"b\", sd=1)\n",
+    "    a = pm.Normal(\"a\", mu=0, sigma=5)\n",
+    "    b = pm.HalfNormal(\"b\", sigma=1)\n",
     "    s = pm.Simulator(\"s\", normal_sim, params=(a, b), sum_stat=\"sort\", epsilon=1, observed=data)\n",
     "\n",
     "    trace, sim_data = pm.sample_smc(kernel=\"ABC\", parallel=True, save_sim_data=True)\n",
@@ -509,9 +509,9 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python 3",
+   "display_name": "Python (PyMC3 Dev)",
    "language": "python",
-   "name": "python3"
+   "name": "pymc3-dev"
   },
   "language_info": {
    "codemirror_mode": {
@@ -523,7 +523,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.7.6"
+   "version": "3.8.5"
   }
  },
  "nbformat": 4,

Diff for: examples/samplers/MLDA_introduction.ipynb

@@ -444,7 +444,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.7.6"
+   "version": "3.8.5"
   }
  },
  "nbformat": 4,