New ETL written in Java (#85)

* Add new almighty dropbox


Co-authored-by: jnnfr <[email protected]>

Author: sven1103

CHANGELOG.md

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 # Changelog
 
+# 1.10.0 2021-06-25
+
+* Provides new ETL routine written in Java, that will replace all Jython scripts at some point [PR](https://github.com/qbicsoftware/etl-scripts/pull/85)
+* Support for nf-core pipeline result registration [PR](https://github.com/qbicsoftware/etl-scripts/pull/85)
+
 ## 1.9.0 2021-05-18
 
 * Provides metadata validation for imaging data (OMERO etl). [PR](https://github.com/qbicsoftware/etl-scripts/pull/83)

drop-boxes/register-all-dropbox/README.md

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+# New ETL logic written in Java
+
+Please find the source code of the ETL routine that this article is referring to in the
+[Java openBIS dropboxes](https://github.com/qbicsoftware/java-openbis-dropboxes) Github repository.
+
+## Installation
+
+Please provide the Java binaries as JAR from the [Java openBIS dropbox](https://github.com/qbicsoftware/java-openbis-dropboxes) in this directories
+folder `./lib`.
+
+The DSS needs to be restarted in order to activate this dropbox.
+
+## ETL routine
+
+This dropbox expects a folder containing data and creates new openBIS dataset from it. For more information
+please visit [Java openBIS dropbox](https://github.com/qbicsoftware/java-openbis-dropboxes).

drop-boxes/register-all-dropbox/lib/README.md

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+Put the compiled Java binaries as JARs in this directory in order
+to be loaded by the openBIS DSS class loader on DSS startup.

drop-boxes/register-all-dropbox/plugin.properties

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+#
+# Drop box for registering a fastq file as a data set
+#
+# Variables:
+#   incoming-root-dir
+#     Path to the directory which contains incoming directories for drop boxes.
+incoming-dir = ${incoming-root-dir}/QBiC-register-all-data
+incoming-data-completeness-condition = marker-file
+top-level-data-set-handler = ch.systemsx.cisd.etlserver.registrator.api.v2.JavaTopLevelDataSetHandlerV2
+program-class = life.qbic.registration.MainETL
+storage-processor = ch.systemsx.cisd.etlserver.DefaultStorageProcessor