v3.0.0

• Major revamp to simulation code. Simulations now accessed using DAISIE_sim_*() syntax.
• Constant rate, time-dependent, trait-dependent, and (multiple) split-rate available.
• Relaxed-rate inference available in DAISIE_ML_CS().
• Improved vignettes documenting CS and IW cases.
• Full stt can be returned by setting sample_freq = Inf in DAISIE_sim_*() functions.
• Optional plotting with DAISIE_plot_input(). (Requires additional dependencies).
• Back-end architecture improvements.

v2.0.1

Minor update to v2.0: when empty islands are simulated the output list contains only one element instead of two (where the second indicated stac = 0, i.e. no surviving colonization).

v2.0

Contains the functions used in:

• Valente L., Etienne R.S., Garcia-R J.C. (2019) Deep macroevolutionary impact of humans on New Zealand's unique avifauna. Current Biology , 29, 2563-2569.e4. https://doi.org/10.1016/j.cub.2019.06.058

• Valente L., Phillimore A.B., Melo M. et al. (2020) A simple dynamic model explains the diversity of island birds worldwide. Nature , 579, 92–96. https://doi.org/10.1038/s41586-020-2022-5

• Hauffe T, Delicado D, Etienne R.S. and Valente L. (2020) Lake expansion elevates equilibrium diversity via increasing colonisation. Journal of Biogeography. https://doi.org/10.1111/jbi.13914