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STOFS3D scripts: Fixed an error in tvd.prop scripts. Other incremental changes for STOFS3D upgrades.
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‎src/Utility/Gen_Hotstart/gen_hot_3Dth_from_nc.in

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20 33 !T,S values for pts outside bg grid in nc
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86400. !time step in .nc [sec]
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2 1 2 !# of open bnds that need *3D.th; list of IDs
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64 !# of days needed
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1 !# of days needed
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1 ! # of HYCOM stacks

‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/DEM_info_Statewide.json

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{
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"USGS_1M": {
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"Annotation": "USGS 1m Statewide DEMs",
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"Note": "CT and RI, mainly for breakwaters",
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"File": "/sciclone/schism10/Hgrid_projects/DEMs/USGS_1M_Stationwide/"
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}
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}

‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/DEM_info_BT_CONEDLA22.json ‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/DEM_info_original_patched.json

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"Note": "https://docs.google.com/document/d/1NhGplKh7OyEXmo1EwN6pElrP-seZbWzKuzjvKJC9ew8/edit?usp=sharing",
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"File": "/sciclone/data10/feiye/data20/ChesBay/DEM_version3/bay_dem_v3.1.grd; /sciclone/data10/wangzg/DEM/ChesBay/bay_dem_v3.1.npz"
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},
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"ncei19_n38x75_w075x75_2019v1": {
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"Annotation": "Patch for Nanticoke River in ChesBay",
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"Note": "Patch some very high elevation (~900 m)",
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"File": "/sciclone/schism10/Hgrid_projects/DEMs/CuDEM/Lonlat/ncei19_n38x75_w075x75_2019v1.tif); /sciclone/schism10/Hgrid_projects/DEMs/CuDEM/Lonlat/ncei19_n38x75_w075x75_2019v1.tif)"
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},
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"CuDEM_NCEI_pr": {
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"Annotation": "CuDEM (Continously updated DEM): Puerto Rico",
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"Note": "https://vims0-my.sharepoint.com/personal/feiye_vims_edu/_layouts/15/Doc.aspx?sourcedoc={d6aa1259-6a28-4b12-9caf-58f05600b3b5}&action=edit&wd=target%28DEM.one%7Cae181e84-4618-4faf-8af2-32fe3a6c3d29%2FCuDEM%7C7ed05443-5395-4dee-81b2-a8f7b0d530f2%2F%29&wdorigin=703&wdpreservelink=1",
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"Annotation": "CuDEM (Continously updated DEM): Updated Florida",
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"Note": "https://vims0-my.sharepoint.com/personal/feiye_vims_edu/_layouts/15/Doc.aspx?sourcedoc={d6aa1259-6a28-4b12-9caf-58f05600b3b5}&action=edit&wd=target%28DEM.one%7Cae181e84-4618-4faf-8af2-32fe3a6c3d29%2FCuDEM%7C7ed05443-5395-4dee-81b2-a8f7b0d530f2%2F%29&wdorigin=703&wdpreservelink=1",
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"File": "/sciclone/schism10/lcui01/schism20/DEM/CUDEM/FL/"
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},
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"CuDEM_NCEI19_FL": {
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"Annotation": "CoNED in Northen Gulf of Mexico, 2022 version",
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"Note": "",
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"File": "/sciclone/schism10/Hgrid_projects/DEMs/CONED_2022/npz/"
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},
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"BlueTopo": {
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"Annotation": "BlueTopo",
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"Note": "",
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"File": "/sciclone/schism10/Hgrid_projects/DEMs/BlueTopo/"
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}
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}

‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_region.cpg

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_region.dbf

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_region.prj

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PROJCS["North_America_Albers_Equal_Area_Conic",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-96.0],PARAMETER["Standard_Parallel_1",20.0],PARAMETER["Standard_Parallel_2",60.0],PARAMETER["Latitude_Of_Origin",40.0],UNIT["Meter",1.0]]

‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_region.qmd

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<!DOCTYPE qgis PUBLIC 'http://mrcc.com/qgis.dtd' 'SYSTEM'>
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<qgis version="3.22.5-Bia?owie?a">
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<geographicflag>false</geographicflag>
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<extent/>
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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_region.shp

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_region.shx

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_regions2.cpg

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_regions2.dbf

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_regions2.prj

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PROJCS["North_America_Albers_Equal_Area_Conic",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-96.0],PARAMETER["Standard_Parallel_1",20.0],PARAMETER["Standard_Parallel_2",60.0],PARAMETER["Latitude_Of_Origin",40.0],UNIT["Meter",1.0]]

‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_regions2.qmd

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<!DOCTYPE qgis PUBLIC 'http://mrcc.com/qgis.dtd' 'SYSTEM'>
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<qgis version="3.42.0-Münster">
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<identifier></identifier>
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<parentidentifier></parentidentifier>
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<language></language>
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<type></type>
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<title></title>
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<abstract></abstract>
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<links/>
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<dates/>
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<fees></fees>
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<encoding></encoding>
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<crs>
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<spatialrefsys nativeFormat="Wkt">
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<wkt>PROJCRS["North_America_Albers_Equal_Area_Conic",BASEGEOGCRS["NAD83",DATUM["North American Datum 1983",ELLIPSOID["GRS 1980",6378137,298.257222101,LENGTHUNIT["metre",1]]],PRIMEM["Greenwich",0,ANGLEUNIT["degree",0.0174532925199433]],ID["EPSG",4269]],CONVERSION["North_America_Albers_Equal_Area_Conic",METHOD["Albers Equal Area",ID["EPSG",9822]],PARAMETER["Latitude of false origin",40,ANGLEUNIT["degree",0.0174532925199433],ID["EPSG",8821]],PARAMETER["Longitude of false origin",-96,ANGLEUNIT["degree",0.0174532925199433],ID["EPSG",8822]],PARAMETER["Latitude of 1st standard parallel",20,ANGLEUNIT["degree",0.0174532925199433],ID["EPSG",8823]],PARAMETER["Latitude of 2nd standard parallel",60,ANGLEUNIT["degree",0.0174532925199433],ID["EPSG",8824]],PARAMETER["Easting at false origin",0,LENGTHUNIT["metre",1],ID["EPSG",8826]],PARAMETER["Northing at false origin",0,LENGTHUNIT["metre",1],ID["EPSG",8827]]],CS[Cartesian,2],AXIS["(E)",east,ORDER[1],LENGTHUNIT["metre",1]],AXIS["(N)",north,ORDER[2],LENGTHUNIT["metre",1]],USAGE[SCOPE["Not known."],AREA["North America - onshore and offshore: Canada - Alberta; British Columbia; Manitoba; New Brunswick; Newfoundland and Labrador; Northwest Territories; Nova Scotia; Nunavut; Ontario; Prince Edward Island; Quebec; Saskatchewan; Yukon. United States (USA) - Alabama; Alaska (mainland); Arizona; Arkansas; California; Colorado; Connecticut; Delaware; Florida; Georgia; Idaho; Illinois; Indiana; Iowa; Kansas; Kentucky; Louisiana; Maine; Maryland; Massachusetts; Michigan; Minnesota; Mississippi; Missouri; Montana; Nebraska; Nevada; New Hampshire; New Jersey; New Mexico; New York; North Carolina; North Dakota; Ohio; Oklahoma; Oregon; Pennsylvania; Rhode Island; South Carolina; South Dakota; Tennessee; Texas; Utah; Vermont; Virginia; Washington; West Virginia; Wisconsin; Wyoming."],BBOX[23.81,-172.54,86.46,-47.74]],ID["ESRI",102008]]</wkt>
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<proj4>+proj=aea +lat_0=40 +lon_0=-96 +lat_1=20 +lat_2=60 +x_0=0 +y_0=0 +ellps=GRS80 +towgs84=0,0,0,0,0,0,0 +units=m +no_defs</proj4>
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<srsid>27131</srsid>
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<srid>102008</srid>
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<authid>ESRI:102008</authid>
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<description>North_America_Albers_Equal_Area_Conic</description>
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<projectionacronym>aea</projectionacronym>
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<ellipsoidacronym>EPSG:7019</ellipsoidacronym>
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<geographicflag>false</geographicflag>
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</spatialrefsys>
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</crs>
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<extent/>
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</qgis>

‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_regions2.shp

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/bluetopo_regions2.shx

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/breakwaters_poly.cpg

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/breakwaters_poly.dbf

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/breakwaters_poly.prj

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GEOGCS["GCS_WGS_1984",DATUM["D_WGS_1984",SPHEROID["WGS_1984",6378137.0,298.257223563]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]]

‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/breakwaters_poly.qmd

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<!DOCTYPE qgis PUBLIC 'http://mrcc.com/qgis.dtd' 'SYSTEM'>
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<qgis version="3.42.0-Münster">
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<identifier></identifier>
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<parentidentifier></parentidentifier>
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<language></language>
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<title></title>
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<abstract></abstract>
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<links/>
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<dates/>
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<fees></fees>
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<encoding></encoding>
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<crs>
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<spatialrefsys nativeFormat="Wkt">
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<wkt></wkt>
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<proj4></proj4>
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<srid>0</srid>
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<authid></authid>
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<projectionacronym></projectionacronym>
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<ellipsoidacronym></ellipsoidacronym>
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<geographicflag>false</geographicflag>
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<extent/>
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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/breakwaters_poly.shp

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‎src/Utility/Pre-Processing/STOFS-3D-Atl-shadow-VIMS/Pre_processing/Bathy_edit/DEM_loading/breakwaters_poly.shx

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