.travis.yml

language: cpp
os:
  - osx
  - linux

compiler:
  - gcc
  - clang
before_install:
  - echo $LANG
  - echo $LC_ALL
  - if [ $TRAVIS_OS_NAME == linux ]; then sudo apt-get update -qq; sudo apt-get install -qq libcppunit-dev valgrind r-base-core lcov python-pip doxygen graphviz; pip install --user cpp-coveralls cpplint; fi
  - if [ $TRAVIS_OS_NAME == linux ]; then apt-cache policy zlib*; fi
  - if [ $TRAVIS_OS_NAME == linux ]; then .ci/style.sh; fi
  - if [ $TRAVIS_OS_NAME == osx ]; then brew update && brew bundle; fi

before_script:
  - ./bootstrap

script:
  - make
  - make check
  - ./lasso data/panel_chrom1.txt data/PG0402-C_chrom1.wsaf > /dev/null
  - if [ $TRAVIS_OS_NAME == linux ]; then valgrind ./unit_tests; fi

after_success:
  - coveralls --exclude lib --exclude tests --exclude src/random --exclude src/codeCogs/ --exclude src/export/ --exclude src/gzstream/ --gcov-options '\-lp'