Fix memory leak

martin-steinegger · martin-steinegger · commit 4f04599c3f13 · 2025-01-13T17:08:23.000+09:00
diff --git a/src/prefiltering/PrefilteringIndexReader.cpp b/src/prefiltering/PrefilteringIndexReader.cpp
@@ -289,6 +289,9 @@ void PrefilteringIndexReader::createIndexFile(const std::string &outDB,
         writer.writeData(sequenceLookup->getData(), (sequenceLookup->getDataSize() + 1) * sizeof(char), (keyOffset + SEQINDEXDATA), SPLIT_INDX + s);
         writer.alignToPageSize(SPLIT_INDX + s);
         delete sequenceLookup;
+        if(indexTable != NULL){
+            delete indexTable;
+        }
     }
 
     if (Parameters::isEqualDbtype(seqType, Parameters::DBTYPE_HMM_PROFILE) == false && indexSubset != Parameters::INDEX_SUBSET_NO_PREFILTER) {

Original file line number	Diff line number	Diff line change
`@@ -289,6 +289,9 @@ void PrefilteringIndexReader::createIndexFile(const std::string &outDB,`
`289`	`289`	`writer.writeData(sequenceLookup->getData(), (sequenceLookup->getDataSize() + 1) * sizeof(char), (keyOffset + SEQINDEXDATA), SPLIT_INDX + s);`
`290`	`290`	`writer.alignToPageSize(SPLIT_INDX + s);`
`291`	`291`	`delete sequenceLookup;`
	`292`	`+ if(indexTable != NULL){`
	`293`	`+ delete indexTable;`
	`294`	`+ }`
`292`	`295`	`}`
`293`	`296`
`294`	`297`	`if (Parameters::isEqualDbtype(seqType, Parameters::DBTYPE_HMM_PROFILE) == false && indexSubset != Parameters::INDEX_SUBSET_NO_PREFILTER) {`