config.yml

#### files config ####
data directory : test         # None if not specified
labels.csv : true             # true if data directory contains labels
MS file : sample.mgf          # MS data (.mgf file)


#### labels config (skip if label is ready) ####
db result file :              # path to your database-search result file (.tsv file)
labels log : true             # true/false
fdr : 0.01                    # false discovery rate
decoy prefix : DeBruijn       # decoy indicator


#### sequencer config ####
sequencer log : true          # true/false


#### model config ####
load weights : false          # true/false
train to test : 2,1           # train to test ratio
model log : true              # true/false
dataset directory :           # None if not specified
batch size : 10               # batch size
number of epochs : 5          # number of epochs
verbose : 1                   # verbose (TensorFlow)
validation split : .3         # validation split ratio
save weights : true           # true/false
weight id : 0                 # weight id


#### results config ####
AUC : true                    # calculate AUC
ROC plot : true               # plotting ROC curve
confusion matrix : true       # calculating confusion matrix
results file : true           # creating results file