Remove check for _seq_ca in cluster search to make prostt5-based cluster search work

milot-mirdita · milot-mirdita · commit 9c31b42b4abe · 2025-02-04T19:09:18.000+09:00
diff --git a/src/workflow/StructureSearch.cpp b/src/workflow/StructureSearch.cpp
@@ -189,7 +189,7 @@ int structuresearch(int argc, const char **argv, const Command &command) {
                 }
                 indexReader.close();
             }else {
-                std::vector<std::string> dbsToCheck = {"_seq", "_seq_ca", "_seq_ss", "_seq_h"};
+                std::vector<std::string> dbsToCheck = {"_seq", "_seq_ss", "_seq_h"};
                 for (size_t i = 0; i < dbsToCheck.size(); i++) {
                     std::string db = par.db2 + dbsToCheck[i] + ".dbtype";
                     if (!FileUtil::fileExists(db.c_str())) {

Original file line number	Diff line number	Diff line change
`@@ -189,7 +189,7 @@ int structuresearch(int argc, const char **argv, const Command &command) {`
`189`	`189`	`}`
`190`	`190`	`indexReader.close();`
`191`	`191`	`}else {`
`192`		`- std::vector<std::string> dbsToCheck = {"_seq", "_seq_ca", "_seq_ss", "_seq_h"};`
	`192`	`+ std::vector<std::string> dbsToCheck = {"_seq", "_seq_ss", "_seq_h"};`
`193`	`193`	`for (size_t i = 0; i < dbsToCheck.size(); i++) {`
`194`	`194`	`std::string db = par.db2 + dbsToCheck[i] + ".dbtype";`
`195`	`195`	`if (!FileUtil::fileExists(db.c_str())) {`