error when no seg snps between pops

stsmall · stsmall · commit 3b91fa0a4904 · 2021-01-30T00:34:16.000-05:00
diff --git a/project/stat_modules/sumstats.py b/project/stat_modules/sumstats.py
@@ -230,7 +230,8 @@ def FST(self):
             try:
                 stats_ls.extend(flt)
             except TypeError:
-                breakpoint()
+                flt = [np.nan]*len(quants)
+                stats_ls.extend(flt)
         return stats_ls
 
     def dXY(self):
