BAR

Java Classes

While scripts form the bulk of BAR, some BAR commands are pre-compiled java plugins This directory contains the source code (a Maven project) for the bar package, including:

Utilities

1. Utils, class providing convenience methods to script ImageJ
2. PlotUtils, class providing utility methods that improve ImageJ's plotting capabilities
3. Runner, providing convenience methods to run scripts loaded from JAR files

External Ops

1. Classes exemplifying how to provide external ops outside the core imagej-ops project. This work is explained in more detail on the ImageJ website.

Commands and Plugins

1. BAR Commander, described in Utilities
2. Interactive Plotter, described in Data Analysis
3. Shen-Castan Edge Detector, described in Segmentation
4. Snippet Creator, described in Utilities

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