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setup.py
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import os
from setuptools import setup, find_packages
__package__ = 'jetstream'
src_dir = os.path.join(os.path.dirname(__file__))
pkg_init = os.path.join(src_dir, __package__, '__init__.py')
readme_path = os.path.join(src_dir, 'README.md')
with open(pkg_init) as fp:
for line in fp:
if line.startswith('__version__'):
__version__ = eval(line.split('=', 1)[1])
break
with open(readme_path) as fp:
__readme__ = fp.read()
setup(
name=__package__,
version=__version__,
author='Ryan Richholt',
author_email='[email protected]',
maintainer='Bryce Turner',
maintainer_email='[email protected]',
url='https://github.com/tgen/jetstream',
description='NGS analysis pipeline at TGen.',
long_description=__readme__,
long_description_content_type='text/markdown',
keywords='ngs pipeline automation',
packages=find_packages(exclude=('tests',)),
include_package_data=True,
python_requires='>=3.7',
classifiers=[
'Development Status :: 3 - Alpha',
'Topic :: Utilities',
],
install_requires=[
'networkx>=2.6,<3',
'pyyaml',
'ulid-py',
'jinja2>=3.0.0',
'filelock',
'confuse',
'packaging'
],
extras_require={
'dev': [
'pytest',
'pytest-cov',
]
},
package_data={
'jetstream': ['config_default.yaml']
},
entry_points={
'console_scripts': [
'jetstream=jetstream.cli:main',
],
}
)