update cran comments

Author: thomasp85

cran-comments.md

@@ -1,19 +1,206 @@
-This is a patch release fixing the errors caused by changes to sf, as well as
-fixing a few regressions. As all changes are internal and non-breaking a reverse
-dependency check has not been performed
-
--------
+This is a major release that contains a few breaking changes in the internal
+structure of the ggplot objects. This has resulted in breakage in some of the 
+reverse dependenciees. All have been given a 1 month heads up to update their 
+code.
 
 ## Test environments
-* local OS X install, R 3.6.0
-* ubuntu 14.04 (on travis-ci), R 3.6.0
-* win-builder (devel and release)
+* local R installation, R 3.6.0
+* ubuntu 16.04 (on travis-ci), R 3.6.0
+* win-builder (devel)
 
 ## R CMD check results
 
-0 errors | 0 warnings | 1 note
+0 errors | 0 warnings | 0 note
+
+## revdepcheck results
+
+We checked 3157 reverse dependencies (2685 from CRAN + 472 from BioConductor), comparing R CMD check results across CRAN and dev versions of this package.
+
+ * We saw 30 new problems
+ * We failed to check 79 packages
+
+Issues with CRAN packages are summarised below.
+
+### New problems
+(This reports the first line of each new failure)
+
+* apyramid
+  checking tests ...
+
+* autocogs
+  checking examples ... ERROR
+  checking tests ...
+
+* bayesdfa
+  checking installed package size ... NOTE
+  checking for GNU extensions in Makefiles ... NOTE
+
+* benchr
+  checking tests ...
+
+* biclustermd
+  checking tests ...
+
+* dabestr
+  checking examples ... ERROR
+  checking tests ...
+
+* DeLorean
+  checking installed package size ... NOTE
+  checking dependencies in R code ... NOTE
+  checking for GNU extensions in Makefiles ... NOTE
+
+* describedata
+  checking examples ... ERROR
+
+* ezplot
+  checking examples ... ERROR
+  checking tests ...
+
+* GGally
+  checking examples ... ERROR
+  checking tests ...
+
+* ggdag
+  checking examples ... ERROR
+
+* ggeasy
+  checking tests ...
+
+* ggfortify
+  checking tests ...
+
+* ggpol
+  checking examples ... ERROR
+
+* ggspectra
+  checking examples ... ERROR
+
+* ggstance
+  checking tests ...
+
+* gWQS
+  checking running R code from vignettes ...
+
+* helda
+  checking tests ...
+
+* interactions
+  checking tests ...
+
+* lemon
+  checking tests ...
+
+* mcStats
+  checking tests ...
+
+* plot3logit
+  checking examples ... ERROR
+
+* PSCBS
+  checking tests ...
+
+* RGraphics
+  checking whether package ‘RGraphics’ can be installed ... WARNING
+  checking R code for possible problems ... NOTE
+
+* riskRegression
+  checking tests ...
+
+* Seurat
+  checking examples ... ERROR
+
+* spartan
+  checking tests ...
+
+* survsup
+  checking examples ... ERROR
+
+* tricolore
+  checking examples ... ERROR
+  checking tests ...
+
+* xpose
+  checking tests ...
+
+### Failed to check
 
-* checking installed package size ... NOTE
-    installed size is  6.2Mb
-    sub-directories of 1Mb or more:
-      doc   3.4Mb
+* aslib                    (NA)
+* av                       (NA)
+* BACA                     (NA)
+* BACCT                    (NA)
+* bamdit                   (NA)
+* BayesPostEst             (NA)
+* BayesRS                  (NA)
+* BNSP                     (NA)
+* BPEC                     (NA)
+* bsam                     (NA)
+* BTSPAS                   (NA)
+* CollapsABEL              (NA)
+* crmPack                  (NA)
+* Crossover                (NA)
+* ctsem                    (NA)
+* Deducer                  (NA)
+* DistributionOptimization (NA)
+* DiversityOccupancy       (NA)
+* dynr                     (NA)
+* evoper                   (NA)
+* ewoc                     (NA)
+* fingerPro                (NA)
+* fsdaR                    (NA)
+* G2Sd                     (NA)
+* ggdmc                    (NA)
+* ggtern                   (NA)
+* GUIgems                  (NA)
+* hbbr                     (NA)
+* imageData                (NA)
+* InSilicoVA               (NA)
+* jarbes                   (NA)
+* JointAI                  (NA)
+* L0Learn                  (NA)
+* lilikoi                  (NA)
+* llama                    (NA)
+* LLSR                     (NA)
+* matchingMarkets          (NA)
+* mbgraphic                (NA)
+* mcmcabn                  (NA)
+* MergeGUI                 (NA)
+* metaMix                  (NA)
+* mfbvar                   (NA)
+* MissingDataGUI           (NA)
+* mleap                    (NA)
+* morse                    (NA)
+* mwaved                   (NA)
+* nlmixr                   (NA)
+* OpenStreetMap            (NA)
+* openVA                   (NA)
+* petro.One                (NA)
+* phase1PRMD               (NA)
+* phase1RMD                (NA)
+* PortfolioEffectHFT       (NA)
+* qdap                     (NA)
+* RclusTool                (NA)
+* RcmdrPlugin.FuzzyClust   (NA)
+* Rdrools                  (NA)
+* rmcfs                    (NA)
+* rpanel                   (NA)
+* rrd                      (NA)
+* rrepast                  (NA)
+* RSCAT                    (NA)
+* rstanarm                 (NA)
+* rsvg                     (NA)
+* RtutoR                   (NA)
+* RxODE                    (NA)
+* SeqFeatR                 (NA)
+* sf                       (NA)
+* simmr                    (NA)
+* smartR                   (NA)
+* spcosa                   (NA)
+* stpp                     (NA)
+* TeachingDemos            (NA)
+* trialr                   (NA)
+* vortexR                  (NA)
+* WaveSampling             (NA)
+* XLConnect                (NA)
+* zenplots                 (NA)
+* zooaRchGUI               (NA)