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base.py
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"""
Base and utility classes for pandas objects.
"""
from __future__ import annotations
import textwrap
from typing import (
TYPE_CHECKING,
Any,
Generic,
Literal,
cast,
final,
overload,
)
import numpy as np
from pandas._libs import lib
from pandas._typing import (
AxisInt,
DtypeObj,
IndexLabel,
NDFrameT,
Self,
Shape,
npt,
)
from pandas.compat import PYPY
from pandas.compat.numpy import function as nv
from pandas.errors import AbstractMethodError
from pandas.util._decorators import (
cache_readonly,
doc,
)
from pandas.core.dtypes.cast import can_hold_element
from pandas.core.dtypes.common import (
is_object_dtype,
is_scalar,
)
from pandas.core.dtypes.dtypes import ExtensionDtype
from pandas.core.dtypes.generic import (
ABCDataFrame,
ABCIndex,
ABCSeries,
)
from pandas.core.dtypes.missing import (
isna,
remove_na_arraylike,
)
from pandas.core import (
algorithms,
nanops,
ops,
)
from pandas.core.accessor import DirNamesMixin
from pandas.core.arraylike import OpsMixin
from pandas.core.arrays import ExtensionArray
from pandas.core.construction import (
ensure_wrapped_if_datetimelike,
extract_array,
)
if TYPE_CHECKING:
from collections.abc import (
Hashable,
Iterator,
)
from pandas._typing import (
DropKeep,
NumpySorter,
NumpyValueArrayLike,
ScalarLike_co,
)
from pandas import (
DataFrame,
Index,
Series,
)
_shared_docs: dict[str, str] = {}
class PandasObject(DirNamesMixin):
"""
Baseclass for various pandas objects.
"""
# results from calls to methods decorated with cache_readonly get added to _cache
_cache: dict[str, Any]
@property
def _constructor(self) -> type[Self]:
"""
Class constructor (for this class it's just `__class__`).
"""
return type(self)
def __repr__(self) -> str:
"""
Return a string representation for a particular object.
"""
# Should be overwritten by base classes
return object.__repr__(self)
def _reset_cache(self, key: str | None = None) -> None:
"""
Reset cached properties. If ``key`` is passed, only clears that key.
"""
if not hasattr(self, "_cache"):
return
if key is None:
self._cache.clear()
else:
self._cache.pop(key, None)
def __sizeof__(self) -> int:
"""
Generates the total memory usage for an object that returns
either a value or Series of values
"""
memory_usage = getattr(self, "memory_usage", None)
if memory_usage:
mem = memory_usage(deep=True)
return int(mem if is_scalar(mem) else mem.sum())
# no memory_usage attribute, so fall back to object's 'sizeof'
return super().__sizeof__()
class NoNewAttributesMixin:
"""
Mixin which prevents adding new attributes.
Prevents additional attributes via xxx.attribute = "something" after a
call to `self.__freeze()`. Mainly used to prevent the user from using
wrong attributes on an accessor (`Series.cat/.str/.dt`).
If you really want to add a new attribute at a later time, you need to use
`object.__setattr__(self, key, value)`.
"""
def _freeze(self) -> None:
"""
Prevents setting additional attributes.
"""
object.__setattr__(self, "__frozen", True)
# prevent adding any attribute via s.xxx.new_attribute = ...
def __setattr__(self, key: str, value) -> None:
# _cache is used by a decorator
# We need to check both 1.) cls.__dict__ and 2.) getattr(self, key)
# because
# 1.) getattr is false for attributes that raise errors
# 2.) cls.__dict__ doesn't traverse into base classes
if getattr(self, "__frozen", False) and not (
key == "_cache"
or key in type(self).__dict__
or getattr(self, key, None) is not None
):
raise AttributeError(f"You cannot add any new attribute '{key}'")
object.__setattr__(self, key, value)
class SelectionMixin(Generic[NDFrameT]):
"""
mixin implementing the selection & aggregation interface on a group-like
object sub-classes need to define: obj, exclusions
"""
obj: NDFrameT
_selection: IndexLabel | None = None
exclusions: frozenset[Hashable]
_internal_names = ["_cache", "__setstate__"]
_internal_names_set = set(_internal_names)
@final
@property
def _selection_list(self):
if not isinstance(
self._selection, (list, tuple, ABCSeries, ABCIndex, np.ndarray)
):
return [self._selection]
return self._selection
@cache_readonly
def _selected_obj(self):
if self._selection is None or isinstance(self.obj, ABCSeries):
return self.obj
else:
return self.obj[self._selection]
@final
@cache_readonly
def ndim(self) -> int:
return self._selected_obj.ndim
@final
@cache_readonly
def _obj_with_exclusions(self):
if isinstance(self.obj, ABCSeries):
return self.obj
if self._selection is not None:
return self.obj[self._selection_list]
if len(self.exclusions) > 0:
# equivalent to `self.obj.drop(self.exclusions, axis=1)
# but this avoids consolidating and making a copy
# TODO: following GH#45287 can we now use .drop directly without
# making a copy?
return self.obj._drop_axis(self.exclusions, axis=1, only_slice=True)
else:
return self.obj
def __getitem__(self, key):
if self._selection is not None:
raise IndexError(f"Column(s) {self._selection} already selected")
if isinstance(key, (list, tuple, ABCSeries, ABCIndex, np.ndarray)):
if len(self.obj.columns.intersection(key)) != len(set(key)):
bad_keys = list(set(key).difference(self.obj.columns))
raise KeyError(f"Columns not found: {str(bad_keys)[1:-1]}")
return self._gotitem(list(key), ndim=2)
else:
if key not in self.obj:
raise KeyError(f"Column not found: {key}")
ndim = self.obj[key].ndim
return self._gotitem(key, ndim=ndim)
def _gotitem(self, key, ndim: int, subset=None):
"""
sub-classes to define
return a sliced object
Parameters
----------
key : str / list of selections
ndim : {1, 2}
requested ndim of result
subset : object, default None
subset to act on
"""
raise AbstractMethodError(self)
@final
def _infer_selection(self, key, subset: Series | DataFrame):
"""
Infer the `selection` to pass to our constructor in _gotitem.
"""
# Shared by Rolling and Resample
selection = None
if subset.ndim == 2 and (
(lib.is_scalar(key) and key in subset) or lib.is_list_like(key)
):
selection = key
elif subset.ndim == 1 and lib.is_scalar(key) and key == subset.name:
selection = key
return selection
def aggregate(self, func, *args, **kwargs):
raise AbstractMethodError(self)
agg = aggregate
class IndexOpsMixin(OpsMixin):
"""
Common ops mixin to support a unified interface / docs for Series / Index
"""
# ndarray compatibility
__array_priority__ = 1000
_hidden_attrs: frozenset[str] = frozenset(
["tolist"] # tolist is not deprecated, just suppressed in the __dir__
)
@property
def dtype(self) -> DtypeObj:
# must be defined here as a property for mypy
raise AbstractMethodError(self)
@property
def _values(self) -> ExtensionArray | np.ndarray:
# must be defined here as a property for mypy
raise AbstractMethodError(self)
@final
def transpose(self, *args, **kwargs) -> Self:
"""
Return the transpose, which is by definition self.
Returns
-------
%(klass)s
"""
nv.validate_transpose(args, kwargs)
return self
T = property(
transpose,
doc="""
Return the transpose, which is by definition self.
Examples
--------
For Series:
>>> s = pd.Series(['Ant', 'Bear', 'Cow'])
>>> s
0 Ant
1 Bear
2 Cow
dtype: object
>>> s.T
0 Ant
1 Bear
2 Cow
dtype: object
For Index:
>>> idx = pd.Index([1, 2, 3])
>>> idx.T
Index([1, 2, 3], dtype='int64')
""",
)
@property
def shape(self) -> Shape:
"""
Return a tuple of the shape of the underlying data.
Examples
--------
>>> s = pd.Series([1, 2, 3])
>>> s.shape
(3,)
"""
return self._values.shape
def __len__(self) -> int:
# We need this defined here for mypy
raise AbstractMethodError(self)
@property
def ndim(self) -> Literal[1]:
"""
Number of dimensions of the underlying data, by definition 1.
Examples
--------
>>> s = pd.Series(["Ant", "Bear", "Cow"])
>>> s
0 Ant
1 Bear
2 Cow
dtype: object
>>> s.ndim
1
For Index:
>>> idx = pd.Index([1, 2, 3])
>>> idx
Index([1, 2, 3], dtype='int64')
>>> idx.ndim
1
"""
return 1
@final
def item(self):
"""
Return the first element of the underlying data as a Python scalar.
Returns
-------
scalar
The first element of Series or Index.
Raises
------
ValueError
If the data is not length = 1.
Examples
--------
>>> s = pd.Series([1])
>>> s.item()
1
For an index:
>>> s = pd.Series([1], index=["a"])
>>> s.index.item()
'a'
"""
if len(self) == 1:
return next(iter(self))
raise ValueError("can only convert an array of size 1 to a Python scalar")
@property
def nbytes(self) -> int:
"""
Return the number of bytes in the underlying data.
Examples
--------
For Series:
>>> s = pd.Series(["Ant", "Bear", "Cow"])
>>> s
0 Ant
1 Bear
2 Cow
dtype: object
>>> s.nbytes
24
For Index:
>>> idx = pd.Index([1, 2, 3])
>>> idx
Index([1, 2, 3], dtype='int64')
>>> idx.nbytes
24
"""
return self._values.nbytes
@property
def size(self) -> int:
"""
Return the number of elements in the underlying data.
Examples
--------
For Series:
>>> s = pd.Series(["Ant", "Bear", "Cow"])
>>> s
0 Ant
1 Bear
2 Cow
dtype: object
>>> s.size
3
For Index:
>>> idx = pd.Index([1, 2, 3])
>>> idx
Index([1, 2, 3], dtype='int64')
>>> idx.size
3
"""
return len(self._values)
@property
def array(self) -> ExtensionArray:
"""
The ExtensionArray of the data backing this Series or Index.
Returns
-------
ExtensionArray
An ExtensionArray of the values stored within. For extension
types, this is the actual array. For NumPy native types, this
is a thin (no copy) wrapper around :class:`numpy.ndarray`.
``.array`` differs from ``.values``, which may require converting
the data to a different form.
See Also
--------
Index.to_numpy : Similar method that always returns a NumPy array.
Series.to_numpy : Similar method that always returns a NumPy array.
Notes
-----
This table lays out the different array types for each extension
dtype within pandas.
================== =============================
dtype array type
================== =============================
category Categorical
period PeriodArray
interval IntervalArray
IntegerNA IntegerArray
string StringArray
boolean BooleanArray
datetime64[ns, tz] DatetimeArray
================== =============================
For any 3rd-party extension types, the array type will be an
ExtensionArray.
For all remaining dtypes ``.array`` will be a
:class:`arrays.NumpyExtensionArray` wrapping the actual ndarray
stored within. If you absolutely need a NumPy array (possibly with
copying / coercing data), then use :meth:`Series.to_numpy` instead.
Examples
--------
For regular NumPy types like int, and float, a NumpyExtensionArray
is returned.
>>> pd.Series([1, 2, 3]).array
<NumpyExtensionArray>
[1, 2, 3]
Length: 3, dtype: int64
For extension types, like Categorical, the actual ExtensionArray
is returned
>>> ser = pd.Series(pd.Categorical(["a", "b", "a"]))
>>> ser.array
['a', 'b', 'a']
Categories (2, object): ['a', 'b']
"""
raise AbstractMethodError(self)
@final
def to_numpy(
self,
dtype: npt.DTypeLike | None = None,
copy: bool = False,
na_value: object = lib.no_default,
**kwargs,
) -> np.ndarray:
"""
A NumPy ndarray representing the values in this Series or Index.
Parameters
----------
dtype : str or numpy.dtype, optional
The dtype to pass to :meth:`numpy.asarray`.
copy : bool, default False
Whether to ensure that the returned value is not a view on
another array. Note that ``copy=False`` does not *ensure* that
``to_numpy()`` is no-copy. Rather, ``copy=True`` ensure that
a copy is made, even if not strictly necessary.
na_value : Any, optional
The value to use for missing values. The default value depends
on `dtype` and the type of the array.
**kwargs
Additional keywords passed through to the ``to_numpy`` method
of the underlying array (for extension arrays).
Returns
-------
numpy.ndarray
The NumPy ndarray holding the values from this Series or Index.
The dtype of the array may differ. See Notes.
See Also
--------
Series.array : Get the actual data stored within.
Index.array : Get the actual data stored within.
DataFrame.to_numpy : Similar method for DataFrame.
Notes
-----
The returned array will be the same up to equality (values equal
in `self` will be equal in the returned array; likewise for values
that are not equal). When `self` contains an ExtensionArray, the
dtype may be different. For example, for a category-dtype Series,
``to_numpy()`` will return a NumPy array and the categorical dtype
will be lost.
For NumPy dtypes, this will be a reference to the actual data stored
in this Series or Index (assuming ``copy=False``). Modifying the result
in place will modify the data stored in the Series or Index (not that
we recommend doing that).
For extension types, ``to_numpy()`` *may* require copying data and
coercing the result to a NumPy type (possibly object), which may be
expensive. When you need a no-copy reference to the underlying data,
:attr:`Series.array` should be used instead.
This table lays out the different dtypes and default return types of
``to_numpy()`` for various dtypes within pandas.
================== ================================
dtype array type
================== ================================
category[T] ndarray[T] (same dtype as input)
period ndarray[object] (Periods)
interval ndarray[object] (Intervals)
IntegerNA ndarray[object]
datetime64[ns] datetime64[ns]
datetime64[ns, tz] ndarray[object] (Timestamps)
================== ================================
Examples
--------
>>> ser = pd.Series(pd.Categorical(["a", "b", "a"]))
>>> ser.to_numpy()
array(['a', 'b', 'a'], dtype=object)
Specify the `dtype` to control how datetime-aware data is represented.
Use ``dtype=object`` to return an ndarray of pandas :class:`Timestamp`
objects, each with the correct ``tz``.
>>> ser = pd.Series(pd.date_range("2000", periods=2, tz="CET"))
>>> ser.to_numpy(dtype=object)
array([Timestamp('2000-01-01 00:00:00+0100', tz='CET'),
Timestamp('2000-01-02 00:00:00+0100', tz='CET')],
dtype=object)
Or ``dtype='datetime64[ns]'`` to return an ndarray of native
datetime64 values. The values are converted to UTC and the timezone
info is dropped.
>>> ser.to_numpy(dtype="datetime64[ns]")
... # doctest: +ELLIPSIS
array(['1999-12-31T23:00:00.000000000', '2000-01-01T23:00:00...'],
dtype='datetime64[ns]')
"""
if isinstance(self.dtype, ExtensionDtype):
return self.array.to_numpy(dtype, copy=copy, na_value=na_value, **kwargs)
elif kwargs:
bad_keys = next(iter(kwargs.keys()))
raise TypeError(
f"to_numpy() got an unexpected keyword argument '{bad_keys}'"
)
fillna = (
na_value is not lib.no_default
# no need to fillna with np.nan if we already have a float dtype
and not (na_value is np.nan and np.issubdtype(self.dtype, np.floating))
)
values = self._values
if fillna:
if not can_hold_element(values, na_value):
# if we can't hold the na_value asarray either makes a copy or we
# error before modifying values. The asarray later on thus won't make
# another copy
values = np.asarray(values, dtype=dtype)
else:
values = values.copy()
values[np.asanyarray(isna(self))] = na_value
result = np.asarray(values, dtype=dtype)
if (copy and not fillna) or not copy:
if np.shares_memory(self._values[:2], result[:2]):
# Take slices to improve performance of check
if not copy:
result = result.view()
result.flags.writeable = False
else:
result = result.copy()
return result
@final
@property
def empty(self) -> bool:
return not self.size
@doc(op="max", oppose="min", value="largest")
def argmax(
self, axis: AxisInt | None = None, skipna: bool = True, *args, **kwargs
) -> int:
"""
Return int position of the {value} value in the Series.
If the {op}imum is achieved in multiple locations,
the first row position is returned.
Parameters
----------
axis : {{None}}
Unused. Parameter needed for compatibility with DataFrame.
skipna : bool, default True
Exclude NA/null values. If the entire Series is NA, or if ``skipna=False``
and there is an NA value, this method will raise a ``ValueError``.
*args, **kwargs
Additional arguments and keywords for compatibility with NumPy.
Returns
-------
int
Row position of the {op}imum value.
See Also
--------
Series.arg{op} : Return position of the {op}imum value.
Series.arg{oppose} : Return position of the {oppose}imum value.
numpy.ndarray.arg{op} : Equivalent method for numpy arrays.
Series.idxmax : Return index label of the maximum values.
Series.idxmin : Return index label of the minimum values.
Examples
--------
Consider dataset containing cereal calories
>>> s = pd.Series(
... [100.0, 110.0, 120.0, 110.0],
... index=[
... "Corn Flakes",
... "Almond Delight",
... "Cinnamon Toast Crunch",
... "Cocoa Puff",
... ],
... )
>>> s
Corn Flakes 100.0
Almond Delight 110.0
Cinnamon Toast Crunch 120.0
Cocoa Puff 110.0
dtype: float64
>>> s.argmax()
2
>>> s.argmin()
0
The maximum cereal calories is the third element and
the minimum cereal calories is the first element,
since series is zero-indexed.
"""
delegate = self._values
nv.validate_minmax_axis(axis)
skipna = nv.validate_argmax_with_skipna(skipna, args, kwargs)
if isinstance(delegate, ExtensionArray):
return delegate.argmax(skipna=skipna)
else:
result = nanops.nanargmax(delegate, skipna=skipna)
# error: Incompatible return value type (got "Union[int, ndarray]", expected
# "int")
return result # type: ignore[return-value]
@doc(argmax, op="min", oppose="max", value="smallest")
def argmin(
self, axis: AxisInt | None = None, skipna: bool = True, *args, **kwargs
) -> int:
delegate = self._values
nv.validate_minmax_axis(axis)
skipna = nv.validate_argmax_with_skipna(skipna, args, kwargs)
if isinstance(delegate, ExtensionArray):
return delegate.argmin(skipna=skipna)
else:
result = nanops.nanargmin(delegate, skipna=skipna)
# error: Incompatible return value type (got "Union[int, ndarray]", expected
# "int")
return result # type: ignore[return-value]
def tolist(self) -> list:
"""
Return a list of the values.
These are each a scalar type, which is a Python scalar
(for str, int, float) or a pandas scalar
(for Timestamp/Timedelta/Interval/Period)
Returns
-------
list
See Also
--------
numpy.ndarray.tolist : Return the array as an a.ndim-levels deep
nested list of Python scalars.
Examples
--------
For Series
>>> s = pd.Series([1, 2, 3])
>>> s.to_list()
[1, 2, 3]
For Index:
>>> idx = pd.Index([1, 2, 3])
>>> idx
Index([1, 2, 3], dtype='int64')
>>> idx.to_list()
[1, 2, 3]
"""
return self._values.tolist()
to_list = tolist
def __iter__(self) -> Iterator:
"""
Return an iterator of the values.
These are each a scalar type, which is a Python scalar
(for str, int, float) or a pandas scalar
(for Timestamp/Timedelta/Interval/Period)
Returns
-------
iterator
Examples
--------
>>> s = pd.Series([1, 2, 3])
>>> for x in s:
... print(x)
1
2
3
"""
# We are explicitly making element iterators.
if not isinstance(self._values, np.ndarray):
# Check type instead of dtype to catch DTA/TDA
return iter(self._values)
else:
return map(self._values.item, range(self._values.size))
@cache_readonly
def hasnans(self) -> bool:
"""
Return True if there are any NaNs.
Enables various performance speedups.
Returns
-------
bool
Examples
--------
>>> s = pd.Series([1, 2, 3, None])
>>> s
0 1.0
1 2.0
2 3.0
3 NaN
dtype: float64
>>> s.hasnans
True
"""
# error: Item "bool" of "Union[bool, ndarray[Any, dtype[bool_]], NDFrame]"
# has no attribute "any"
return bool(isna(self).any()) # type: ignore[union-attr]
@final
def _map_values(self, mapper, na_action=None):
"""
An internal function that maps values using the input
correspondence (which can be a dict, Series, or function).
Parameters
----------
mapper : function, dict, or Series
The input correspondence object
na_action : {None, 'ignore'}
If 'ignore', propagate NA values, without passing them to the
mapping function
Returns
-------
Union[Index, MultiIndex], inferred
The output of the mapping function applied to the index.
If the function returns a tuple with more than one element
a MultiIndex will be returned.
"""
arr = self._values
if isinstance(arr, ExtensionArray):
return arr.map(mapper, na_action=na_action)
return algorithms.map_array(arr, mapper, na_action=na_action)
@final
def value_counts(
self,
normalize: bool = False,
sort: bool = True,
ascending: bool = False,
bins=None,
dropna: bool = True,
) -> Series:
"""
Return a Series containing counts of unique values.
The resulting object will be in descending order so that the
first element is the most frequently-occurring element.
Excludes NA values by default.
Parameters
----------
normalize : bool, default False
If True then the object returned will contain the relative
frequencies of the unique values.
sort : bool, default True
Sort by frequencies when True. Preserve the order of the data when False.
ascending : bool, default False
Sort in ascending order.
bins : int, optional
Rather than count values, group them into half-open bins,
a convenience for ``pd.cut``, only works with numeric data.
dropna : bool, default True
Don't include counts of NaN.
Returns
-------
Series
Series containing counts of unique values.
See Also
--------
Series.count: Number of non-NA elements in a Series.
DataFrame.count: Number of non-NA elements in a DataFrame.
DataFrame.value_counts: Equivalent method on DataFrames.
Examples
--------
>>> index = pd.Index([3, 1, 2, 3, 4, np.nan])
>>> index.value_counts()
3.0 2
1.0 1
2.0 1
4.0 1
Name: count, dtype: int64
With `normalize` set to `True`, returns the relative frequency by
dividing all values by the sum of values.
>>> s = pd.Series([3, 1, 2, 3, 4, np.nan])
>>> s.value_counts(normalize=True)
3.0 0.4
1.0 0.2
2.0 0.2
4.0 0.2
Name: proportion, dtype: float64
**bins**
Bins can be useful for going from a continuous variable to a
categorical variable; instead of counting unique
apparitions of values, divide the index in the specified
number of half-open bins.
>>> s.value_counts(bins=3)
(0.996, 2.0] 2
(2.0, 3.0] 2
(3.0, 4.0] 1
Name: count, dtype: int64
**dropna**
With `dropna` set to `False` we can also see NaN index values.
>>> s.value_counts(dropna=False)
3.0 2
1.0 1
2.0 1
4.0 1
NaN 1
Name: count, dtype: int64
"""
return algorithms.value_counts_internal(
self,
sort=sort,
ascending=ascending,
normalize=normalize,
bins=bins,
dropna=dropna,
)
def unique(self):
values = self._values
if not isinstance(values, np.ndarray):
# i.e. ExtensionArray
result = values.unique()
else:
result = algorithms.unique1d(values)
return result
@final
def nunique(self, dropna: bool = True) -> int:
"""
Return number of unique elements in the object.
Excludes NA values by default.
Parameters
----------
dropna : bool, default True
Don't include NaN in the count.