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01_ProjectStructure.ipynb

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"metadata": {},
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"source": [
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"# Project structure\n",
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"<h1>Project structure</h1>\n",
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"Good project layout ensures: \n",
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"<ul>\n",
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" <li>Integrity of the data</li>\t<li>Portability of the project</li>\t<li>Easier to pick the project back up after a brake</li></ul> <br><br>There is no single way to organise a project.... but we need to take advantage of the power of convention.<div class=\"info\">\t\"A place for everything, everything in its place\"<p class='caption_p'>- Benjamin Franklin</p></div></div> \n",
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" <li>Integrity of the data</li>\n",
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" <li>Portability of the project</li>\n",
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" <li>Ease to pick the project back up after a break or change in personnel</li>\n",
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"</ul> \n",
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"<br><br>There is no single way to organise a project.... but we need to take advantage of the power of convention.\n",
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"\n",
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"<div class=\"info\">\"A place for everything, everything in its place\"<p class='caption_p'>- Benjamin Franklin</p></div></div> \n",
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" \n",
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" \n",
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"The image below gives a suggested structure for a project\n",
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"The image below gives a suggested structure for a project. You will notice that it is quite opinionated when it comes to the \n",
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"use of certain files and names.\n",
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"\n",
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"![](./assets/filesystem.PNG)\n",
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"\n",

02_WorkingWithData.ipynb

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"<div class='info'> The raw data *should* never change. All of the processing or data wrangling must be done in copies of your raw data. </div>\n",
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"\n",
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"<br>\n",
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"However it is important to consider how you are going to share your data. The [best practices for sharing data on the Web summary](https://www.w3.org/TR/dwbp/#bp-summary) is a good place to get started.\n",
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"However, it is important to consider how you are going to share your data. The [best practices for sharing data on the Web summary](https://www.w3.org/TR/dwbp/#bp-summary) is a good place to get started.\n",
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"\n",
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"You can also explore alternatives like [git annex](https://git-annex.branchable.com/) and [Datalad](http://datalad.org/) to version control your data, or [FigShare](https://figshare.com/) to share your data.\n"
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environment.yml

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- nbval
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- nbdime
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- recipy
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- hypothesis
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- pipenv
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- jupyter-repo2docker

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