[develop] UFS-SRW-AQM Build Errors on WCOSS2

[drnimbusrain]

Expected behavior

UFS-SRW-AQM [develop] branch should build on WCOSS2.

Current behavior

UFS-SRW-AQM [develop] branch has errors in build on WCOSS2.

Machines affected

WCOSS2

Steps To Reproduce

https://ufs-srweather-app.readthedocs.io/en/develop/UsersGuide/BuildingRunningTesting/AQM.html#quick-start-guide-srw-aqm

git clone -b develop https://github.com/ufs-community/ufs-srweather-app
cd ufs-srweather-app
./app_build.sh -p=wcoss2 -a=ATMAQ --extrn
./manage_externals/checkout_externals
./devbuild.sh -p=wcoss2 -a=ATMAQ

Detailed Description of Fix (optional)

Additional Information (optional)

Possible Implementation (optional)

Output (optional)

/lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240724_develop/sorc/ufs-weather-model/FV3/io/module_write_netcdf.F90(424): error #6404: This name does not have a type, and must have an explicit type.   [NF90_DEF_VAR_ZSTANDARD]
              ncerr = nf90_def_var_zstandard(ncid, varids(i), zstandard_level(grid_id)) ; if (ncerr /= nf90_noerr) write(0,*) "file: ", "module_write_netcdf.F90", " line: ", 424, trim(nf90_strerror(ncerr));     if (ncerr /= nf90_noerr) call ESMF_Finalize(endflag=ESMF_END_ABORT)
----------------------^
/lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240724_develop/sorc/ufs-weather-model/FV3/io/module_write_netcdf.F90(443): error #6404: This name does not have a type, and must have an explicit type.   [NF90_DEF_VAR_QUANTIZE]
              ncerr = nf90_def_var_quantize(ncid, varids(i), quant_mode, quantize_nsd(grid_id)) ; if (ncerr /= nf90_noerr) write(0,*) "file: ", "module_write_netcdf.F90", " line: ", 443, trim(nf90_strerror(ncerr));     if (ncerr /= nf90_noerr) call ESMF_Finalize(endflag=ESMF_END_ABORT)
----------------------^
compilation aborted for /lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240724_develop/sorc/ufs-weather-model/FV3/io/module_write_netcdf.F90 (code 1)
make[5]: *** [FV3/CMakeFiles/fv3atm.dir/build.make:283: FV3/CMakeFiles/fv3atm.dir/io/module_write_netcdf.F90.o] Error 1
make[5]: *** Waiting for unfinished jobs....
/lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240724_develop/sorc/ufs-weather-model/FV3/io/module_write_restart_netcdf.F90(385): error #6404: This name does not have a type, and must have an explicit type.   [NF90_DEF_VAR_ZSTANDARD]
            ncerr = nf90_def_var_zstandard(ncid, varids(i), zstandard_level(1))
--------------------^
/lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240724_develop/sorc/ufs-weather-model/FV3/io/module_write_restart_netcdf.F90(387): error #6404: This name does not have a type, and must have an explicit type.   [NF90_ENOFILTER]
               if (ncerr == nf90_enofilter) then
----------------------------^
compilation aborted for /lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240724_develop/sorc/ufs-weather-model/FV3/io/module_write_restart_netcdf.F90 (code 1)
make[5]: *** [FV3/CMakeFiles/fv3atm.dir/build.make:296: FV3/CMakeFiles/fv3atm.dir/io/module_write_restart_netcdf.F90.o] Error 1
^[[Bmake[4]: *** [CMakeFiles/Makefile2:416: FV3/CMakeFiles/fv3atm.dir/all] Error 2

@chan-hoo

[chan-hoo]

@drnimbusrain, I am sorry. I don't have access to WCOSS2 any more (other EPIC code managers as well). This may be the module file issue. The module files have not been updated since I left EMC. Moreover, as far as I know, uwtools was not available on WCOSS2 yet. The develop branch will not work correctly without it.

[drnimbusrain]

@chan-hoo @gspetro @MichaelLueken I understand EPIC does not support WCOSS2 for UFS-SRW-App coupled AQM, but still trying to get latest [develop] version build on WCOSS2 exactly following the latest documentation: https://ufs-srweather-app.readthedocs.io/en/develop/UsersGuide/BuildingRunningTesting/AQM.html

git clone -b develop https://github.com/ufs-community/ufs-srweather-app
cd ufs-srweather-app

./manage_externals/checkout_externals

./devbuild.sh -p=wcoss2 -a=ATMAQ

Now I see the following build errors, which points to an issue with UPP submodule in FV3 when using later versions of ufs-weather-model:

/lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240212_develop/sorc/ufs-weather-model/FV3/upp/sorc/ncep_post.fd/grib2_module.f(499): error #6580: Name in only-list does not exist or is not accessible. [G2SEC4_TEMP9]
g2sec4_temp0,g2sec4_temp8,g2sec4_temp9,g2sec4_temp44, &
-----------------------------------------------------^
/lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240212_develop/sorc/ufs-weather-model/FV3/upp/sorc/ncep_post.fd/grib2_module.f(500): error #6580: Name in only-list does not exist or is not accessible. [G2SEC4_TEMP46]
g2sec4_temp46,g2sec4_temp48,g2sec5_temp0,g2sec5_temp2, &
---------------------------^
/lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240212_develop/sorc/ufs-weather-model/FV3/upp/sorc/ncep_post.fd/grib2_module.f(502): error #6580: Name in only-list does not exist or is not accessible. [G2SEC4_TEMP49]
g2sec4_temp49
---------------------------^
[ 49%] Building Fortran object AQM/CMakeFiles/CCTM.dir/src/model/CMAQ/CCTM/src/gas/ebi_cb6r3_ae6_aq/DEGRADE_SETUP_TOX.F.o
compilation aborted for /lfs/h2/oar/arl/noscrub/Patrick.C.Campbell/run_ufs_srw_aqm/run_na_test_ufs-srw-app_20240212_develop/sorc/ufs-weather-model/FV3/upp/sorc/ncep_post.fd/grib2_module.f (code 1)
make[5]: *** [FV3/upp/sorc/ncep_post.fd/CMakeFiles/upp.dir/build.make:868: FV3/upp/sorc/ncep_post.fd/CMakeFiles/upp.dir/grib2_module.f.o] Error 1
make[5]: *** Waiting for unfinished jobs....

Interestingly, I try this same procedure on Hera with [develop], and I do not get these errors (but do see this same error on Hera with other older workflows like [aqm_dev]). Is there any guidance out there on how to fix this and proceed?

Thank you, Patrick

@iri

[MichaelLueken]

@drnimbusrain -

While the versions/build.ver.wcoss2 and required libraries haven't been updated for WCOSS2 in a long time, you will need to source the versions/build.ver.wcoss2 before launching the devbuild.sh script:

source versions/build.ver.wcoss2

Once you have done this, then modulefiles/build_wcoss2_intel.lua should be able to identify the library versions and load the modules, unless they no longer exist on the machine.

[drnimbusrain]

Thank you for the reply. I don't know if this error is a module/library issue, but rather code. I have seen the error on other systems, like Hera.

…

On Wed, Feb 12, 2025, 1:17 PM Michael Lueken ***@***.***> wrote: @drnimbusrain <https://github.com/drnimbusrain> - While the versions/build.ver.wcoss2 and required libraries haven't been updated for WCOSS2 in a long time, you will need to source the versions/build.ver.wcoss2 before launching the devbuild.sh script: source versions/build.ver.wcoss2 Once you have done this, then modulefiles/build_wcoss2_intel.lua should be able to identify the library versions and load the modules, unless they no longer exist on the machine. — Reply to this email directly, view it on GitHub <#1112 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AGLFYNXVNVCP54AYEZK2B7T2POF5JAVCNFSM6AAAAABLNTYXHWVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDMNJUGUYDONJTG4> . You are receiving this because you were mentioned.Message ID: ***@***.***>